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cn_combo_scaffold_6120_5

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 2478..3761

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Pseudomonas sp. PAMC 25886 RepID=UPI000289F3EB similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 418.0
  • Bit_score: 311
  • Evalue 1.90e-81
Uncharacterized protein {ECO:0000313|EMBL:KIY42335.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 430.0
  • Bit_score: 313
  • Evalue 4.10e-82
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 410.0
  • Bit_score: 294
  • Evalue 6.70e-77

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Taxonomy

Pseudomonas sp. 10-1B → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGGACGGAATTCTGCGCCTCCCGGAGCCCGAATTTGGCGCGATAATGAAAAAGGTTCTGTCGCCATCTCAGGCCATTCAGACCCCAGATTTGCTCAAAGGGCGTGACAAGCAGCTCGACGATATACGACGAGCCCTCTACCTCGATGGTAGGCAAGTTTTTATTTATGGGTATCGAGGGGTTGGTAAAACCTCGCTGGCCCAGACCGCAGCATACAAATATCAGTCGTCAGAAAAAGAGCCCATTAAGCTGGGCTGCACTGAGAACGGTACGTTCTTTCAGACGATGCATGATTTGTTCGTCAAAGCATTTCCAACAGACCCCTCAATCATCAAGAAAGTTTTGAAAAGTGGCTTCAGTGCCAAGCTGCAAGGCCTTTCAGCCGAAGTAAAGGAATCGGTTGAAAAAGGACGAATTCCCGAACTCACATCTGTCAACGAGGCAGTTGCTCTCACTGATTTCGTTGCATCCGTTCATTCAAAGCGGCCTGTCGTAATTTTGGACGAGTTTGATTTGATTAGGTCGCCAGAGCAGCAGGCACTCTTTGCAGGATTCGTAAAGCAGATCGCAGATCAACGCATCAATATACGATTCTTCTTTTGTGGGATTGCCGACTCACTTGACGACTTTTTCAGCGCACATGAGTCCACTTATCGATACTTCCATACGGTGCAATTGGATCGCCTTGAAATCACGCCAAGACTCGAAATCATCGACAACGCAGCCCATGCACTGTCGATTCATGTCGACGACCATACGACCCGTCGCATAGCTCGCATAAGCGACGGCTTTCCGCACTTCATACATCTGATTTGTGAGAAGCTATTTTGGATCGTCTACAATGACCCACGAAGCGCCATGCGTGCTACGCCGGATCATTTTGTTCGCGCCGTTACGGATGCTGTCCAAGACATAATGCCATATCTCCGTCGGCCCTATGAAAAAGCGACGCGCAAATATACGAACGACGCAGAGCCAATACTCTGGGCTATCGCGGACAATCACGAGCTTCAGAGGCCATCTCGGGATATCTACAAATCTTATGAACGCATAACTAAATCAATGCCGGGTATGGAGACACTTACGCGTGATCGATTTAATGCCCGCATTAACAATCTGAAAACTCCAGCATCAGGCTCAATCGTCACCGCTACCCGTTCTGGATGGTACGAATTTCGAGAGAAGATGATACGCGGTTATGCGAGGATGCGAGCTGAACAACAGGGCGTCGAACTGGATATAGAGCATCCACTCCAGAATCGTAGGCCATTGAGCAGTCTTTAG
PROTEIN sequence
Length: 428
MDGILRLPEPEFGAIMKKVLSPSQAIQTPDLLKGRDKQLDDIRRALYLDGRQVFIYGYRGVGKTSLAQTAAYKYQSSEKEPIKLGCTENGTFFQTMHDLFVKAFPTDPSIIKKVLKSGFSAKLQGLSAEVKESVEKGRIPELTSVNEAVALTDFVASVHSKRPVVILDEFDLIRSPEQQALFAGFVKQIADQRINIRFFFCGIADSLDDFFSAHESTYRYFHTVQLDRLEITPRLEIIDNAAHALSIHVDDHTTRRIARISDGFPHFIHLICEKLFWIVYNDPRSAMRATPDHFVRAVTDAVQDIMPYLRRPYEKATRKYTNDAEPILWAIADNHELQRPSRDIYKSYERITKSMPGMETLTRDRFNARINNLKTPASGSIVTATRSGWYEFREKMIRGYARMRAEQQGVELDIEHPLQNRRPLSSL*