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cn_combo_scaffold_6243_3

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1285..3027)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, Fis-type n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3V1_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 605.0
  • Bit_score: 384
  • Evalue 1.80e-103
Fis family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 585.0
  • Bit_score: 694
  • Evalue 1.50e-196
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 605.0
  • Bit_score: 384
  • Evalue 5.10e-104

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Taxonomy

R_Alphaproteobacteria_46_13 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1743
ATGGCTTACCAAACTTTAACCCAAGCCGAAATCCAACCATCCATCCTGAACCCGCGTAAGGCGTTCAACGATAAAACCATCGAAGAATTGGCGCAGTCTATCAAAACAGACGGGCTTTTGCAGAACCTTGTAGTCTTAAAACCGAAAGAAAAAAACAAAAAATATAGTATTCTGGCGGGAGAACGCGGTTTCCGCGCCATCTCCCACCTGATCGAAAAAGGGGATTTGCCCAAAGACTTCCTGATTTCAGTGGAGATCAAGGAAAACCTTTCCGAGGACGAAGCCTTGCGCATTTCCATGGTTGAGAACATCCAACGCGAAAACCTTGCCCCGTTGGAAGAAGCAAACGCTTTGGCTTCGCTGGTCAAAAACGGGGAGAAGCTGGACGATATCGTCGCTCAAACAGGACTTTCGGTTGCCACCATCCGCCGCCGTCTGATGTTGTTGCAACTGTCCGATGCCGTCAAGGATGCCCTGAACGCCCAGCAAATAACGCTTTCTCAAGCAGAGGCTCTGGCGATTGGGAAGCATGAGGCGCAGGATGAGGCGCTTGATGAAATTCTTGGGGGGTATATTAGCAGCACTGATGATATCAAAGATACGATGGTAGGCAATCTGCCCACCTTGTCGATGGCGATTTTTCCTAAAGAAATGTATTCAGGTGATTTCACCCGAGACTTGCTGTCCGAAGACAACCGTACCTACTTTAACGATGTTGACCAGTTTTTAGATTTGCAAAAACAGGCAGCAGAAAGTCTGGTAACACAATATACCGAAACCCATGACTGGGCTGAACTTCAACAAGGCTACAGCTTCCATTCATGGGAGTATAGCGAAGCAGAAGACGGGCAGAAAGGCGGCGTTGTTGTTTTCTTGTCCAATAACGGTGATGTTTCGGTGCATGAGGGGCTGGTTAAGTCGGAAGCAGATGCCACGACCACAACCATGATCAAGGGCAAAGCCAAGGCATTTTACCCGACCCCGTTGGTGCGGTATATATCCCACCAAAAGAGCGTAGCCGTTCAAGCATCGTTGCTACAAAATCCCCGTAAGGTGCGAGAGCTGGCCGTTTCTAAGAAACTGTCGACTTTTAAGGCGCATGCGTGTCTGGATTACTTTGCCGCCGAGCAGATCAATCCAATCGGGCTAAGAATACTCAACGCGGTTGCGCAAGACCTAATGCCCTCTTTGGGGCTCTCCTCAATTGAAAACATGGCGGATTGGGCGGTACTGGCTCATTCATTTTATGTCGATGCGGAGGGCGCATATGAAGTTGTGCAAACGCTGACCGACAAAGAGCTGGATTATCTGTCCAGTTTCTTGGAAGTATGCGAGTTTGGTCAGAGTTTCTGTGACCGACTGGATGGTGATGCCAATTCATTGTTCAACCGTATAACAATTGATCTGGGTGTTGATATGCGTGACTACTGGATTCCTGATGCAGGTTTCTTGAAACGCCGCACCACATTCCAGTTACAGCAGATCATCCAGCAATCGGGAGCGTCAGCCCGCATAGGCAACGCATCCAACTACAAAAAAGCGGAACTTGTAACTGCTTTGACCAAGTATTTTCTGAATGCCAAGAATGCACAGGAACCCACCGATTCCGAGAAACAAGCGGCATCTTGGCTTCCCGAGGCAATGGACTTTCCAGCCATTGACCCCGATCGAACAGATCGTAGTTCTGAATGTGAGGCTGACGGATTGTCAGACGATGATCAATCTGATGATGATGTAGAATAA
PROTEIN sequence
Length: 581
MAYQTLTQAEIQPSILNPRKAFNDKTIEELAQSIKTDGLLQNLVVLKPKEKNKKYSILAGERGFRAISHLIEKGDLPKDFLISVEIKENLSEDEALRISMVENIQRENLAPLEEANALASLVKNGEKLDDIVAQTGLSVATIRRRLMLLQLSDAVKDALNAQQITLSQAEALAIGKHEAQDEALDEILGGYISSTDDIKDTMVGNLPTLSMAIFPKEMYSGDFTRDLLSEDNRTYFNDVDQFLDLQKQAAESLVTQYTETHDWAELQQGYSFHSWEYSEAEDGQKGGVVVFLSNNGDVSVHEGLVKSEADATTTTMIKGKAKAFYPTPLVRYISHQKSVAVQASLLQNPRKVRELAVSKKLSTFKAHACLDYFAAEQINPIGLRILNAVAQDLMPSLGLSSIENMADWAVLAHSFYVDAEGAYEVVQTLTDKELDYLSSFLEVCEFGQSFCDRLDGDANSLFNRITIDLGVDMRDYWIPDAGFLKRRTTFQLQQIIQQSGASARIGNASNYKKAELVTALTKYFLNAKNAQEPTDSEKQAASWLPEAMDFPAIDPDRTDRSSECEADGLSDDDQSDDDVE*