ggKbase home page
Advanced Search
Search Help

cn_combo_scaffold_6575_7

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(4311..8870)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA helicase n=1 Tax=Sphingomonas elodea RepID=UPI0002630412 similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 999.99
  • Bit_score: 1984
  • Evalue 0.0
putative DNA helicase-like protein similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 999.99
  • Bit_score: 1792
  • Evalue 0.0
  • rbh
Putative DNA helicase-like protein {ECO:0000313|EMBL:AJA09823.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sph similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 999.99
  • Bit_score: 1792
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4560
ATGGCGACAGTGCAAGATGGTGAGATGGCTCCCTCGCAGGCGCGGCGTGGGGAGGTCGCGAGGCTTTTCGACGAAACCCGCCGCCGCCTCGTCGAGACGGGGACAAGGAACCGGCTCGTCCACGTGAATCGCGCCAATACACGCGGCAATGTGATCAATGTCGTCAACGAACGGTCGGACGACATACATGATATCCTCAGTGGCTCGAAGGTGATGCGGTTTCTCGCGCTCGGCCGCGACAAATCCGACGATGACGACGAGGTCCATCTCGCGACAACCATGGACGAGCCCGATGCCGACCGTTTCACGGATTGGCATCTCGAAACTCGGCTTGGTCCGGACGCCCTCCAGAAGAAGCTGCTCAAAATCGCTCGCGAGGCCCAGACGGCCGAGGAGGAGAGCGGCGTCAACATCCTCTATCTGGCTCTCGGTTTCCTGACTTGGTTCGAGGACCGAAACTCCGGGATCGAGCGGGAAGCTCCACTCGTGCTCCTGCCTGTTGAGCTTGTGCGCAACCCTCGCACCTCGACGTACGACATTCGTGCGCGTGACGAAGAGATCCTGACGAATTTGCCGCTACAGCAGCGGCTCAAGGATGACTTCGGTATCGACCTACCCGAGATTGACGGCGAGGAAGAATGGAAGCCCTCAAATTATTTTGAACGCGTCGAAGCGGTCATAGCGTCGCGGGATCGCTGGCGGGTCGACCGAGACGCGATCCAGCTCGGCTTTTTCAGCTTCAGCAAACTTCTGATGTATCGGGATCTCGACATCGAATCCTGGCCCGATGAGGCTCTGGCCGATCATCCGCTCACGCGGGGTCTGCTTTATGAGGGCTTTGCCAACGAGCCGCCACTGTTCGGCCCTGAGGACCAGCTCGACGATTTGCTCCCGCCCGAGCAAATTTTCCACGTCGTCGATGCGGACGCATCGCAGGCCAAGGTGATCGAAGAGGTGCGGTCCGGCAGAAATCTGGTCGTGCAAGGACCGCCCGGCACGGGAAAAAGTCAGACGATCACCAACATCATTGCGACCGCAGCAAAGGACGGAAAACGCGTTCTGTTCGTCGCCGAGAAGATGGCGGCACTGTCGGTTGTGCACGACCGTCTGGTCAAGGTTGGCCTGCGGGACGTGTGCCTCGAGCTCCACTCCCGTACGGCCAACAAGAAGATTGTCCTCGCCGAACTTGCCCGCACTATCTCGCAGGCTTCAGCGATCCCGCAGATGCCGGATGCCCCACATTCCCTTACCAGTGCACGCGATCGCCTGAATGGCATCGCTGCAGCTCTTCACGAGCCAATCGGCTCGACCGGTGAAACCGCCTTTTCGGTTCTCGGCCGACAGGTCCGTTACATCGGTATGGAGGCCACGCCGCCTGTGATGGATGCGAGTCCTCTGTTGAGGCTCACGCGGGCGGAGGAAACCGCGCTGATCGAAACGATCGAGCGCTATGGCGAGTTGCTCGCCGACGAAGGCGTGGACGCCCCGCACCCGTTCGAGGGGGCGAGAAATCTTGATCTCCAGCCCGTCGACCTGGCCCGCCTTGCCTCCGTGTTGACGAGTGCCAAGACAGCTCTCGAGGAACTAGCCATCGCCGTTGAGCCAGCGGTGAACGCCATTGGCTTGTCTCAGCCTGTCACCCTCGAAAACGCAGATGCGCTGATTGACGTTCTGTCGAGGCTTGGGGGCCTTCCACAGGGAGCTGCTCCCATAGCAGTATCCATGCTGGACGCGTCGGATCCGGTCCGTCTTTCGGAGCTACTCAGGGCAGGGTTGGACTGGCGGTCGGAATTCGATGCACAGGCGTCGAATTTTACCGACGCGGCGTTCGCGCACCCCGTCACCTCATTGCGTGGTTCGCTGATCGCGGGCTGCGATTCGTTCTTCGCCCGGCTTGGCGGTGCTTACCGCGGGGCCTCGCGCGAACTTGCCGGCCTCCTCCGTGGTCCCCTGCCCAAGTCGGCGCAAGAGAGGGTCGCACTGGTCGATGCTCTTAGTGACGTGGGAAGCAAGCGGGCAGTCTGGGAGACAGATCAGGCCTATGGTGAGCGCACCCTGGGCGATGCTTGGCGAGGCGACCGCAGTGACTTCCCAATGCTGCTTTCAATCGCTGGCTGGTGCGACAAGCTCAGCCAAGCGAAGCTCAAGGTCGCTCCCTTGGCTGCGACTGAAATGGCCGCTTCGAGTGAGGCGCCTTCGATGCTCCATCGGCTGATCGAGGCGACGAACACCGCTCGCACCAAGCTCGCCGCCGCCACGGACGTCCTGGACCTTGATCCAGCCACAGTGAGCGCTGAACGGTTCGAGCAGGCAGAGGTCTGGTCTCTCGTCCTTCGTATAGGGAGCATGGCAGCAGCGACGGACCGCTACGCGGGGTGGGTGCAACTCGCGAGGATGTCCGGCCGTATGACCGCCGCTGGCCTTGCAGAACTGGCGGACCGCATGCGTACCGGGGCCGTTTCTGGCTCTGACGCTGTTGTGGAGCTGCGGTTCGCACGCGCCGAAGGACTGTGGCGCCATGCGCTTGAACAATCCCCAGTTCTGCGCGAACTGCCGATGGAAAAGCGCCACGAACTTGTCAGCACATTCGCACAGCTCGAGCGCAACCGTCTGAAGGACAATGTTACCGACATCCTGGCAGGCCATTTAGCCCAGGTTCCGCAGGGAGCCCAAGGCGAGATGGGGGTGATCCGGAGCGAGATCGGCAAGAAGATGCGGCATCTCGCCATCCGTCGCCTTTTCGAGAGAGCTGGAACCGCTATCCAGCGAATTAAGCCTGTGCTTTTGATGAGCCCGATCTCGGTCGCGCAATATCTCCCGCCAAGCGCCCTTACTTTCGACCTGCTTGTCATCGACGAAGCTAGCCAGGTGCGGCCTGAAGACGCGCTTGGCGCCATTGCCCGTGCCAATCAGATCGTCGTGGTCGGAGACCAAAAGCAACTGCCGCCGTCCTCCTTCTTCGACAGGCTTGCCGCAAACGATGATGCCGACGAAGACGAACCCGAATTGCTGGCAGGCGCCGCGAAGGTAGCCGCCATGGAAAGTGTCCTGACGCTGTGCGAGGCGCGTGGCCTCGGCTCACGCATGCTCGAGTGGCACTACCGCTCCCGCGACCCCTCGCTAATCAAAGTTTCGAACCGCGAATTCTACGAAGACGGCCTGATCCTGCCGCCATCTCCGCTCCAGGCGGACCCCGAGTTCGGACTTTGCTTCACGCAGGTCGCGGGCGTTTACGACAAAGGGGGCAAGCGCGACAACCGCAAGGAGGGCGAGGCGATCGTCAGTCGTGTCGCAGAGCATGCGCGCAAGCACCCAAGCCTGTCTCTCGGGATTGTAACTTTCTCGTTCGCCCAGCGAAACCTGATTACCGAACTGCTCGAGCTAGCCCGCCGTAGCGACACTGTGCTTGACGCGTTCATGCGCGAGGGACAGTCCGAGGACATCTTCGTAAAGAACATCGAGAACGTGCAGGGCGACGAGCGCGACGTCATCCTGGTGAGCGTCGGTTACGGTCCCGCTGTTGCGGGTGGCAGGCTCACGAGCATGTCGTTCGGTCCGGTGAATGGCGAAGGCGGAGAGCGTCGCCTCAACGTCCTCTTCACTCGTGCGCGGATTCGCTGCGAAGTGTTCGCTTCTTTCGATCCCGGCGACATCGATGTCAGCAGAACAGCGGGAGATGGTCCGCGCATCCTCAAGCGCTTCCTCGAATACGCGAAGACAGGGCAACTCGAAGAACATTCGCCAACCGGGCTCGGCGCGGACACGCCCTTTGAAGAGGACGTGGCCGATGTGATCCGCAGCCTAGGCTTCCTTGCAGATCCGCAGGTCGGTTCGGCTGGGTTCCGTATCGACATCGGCGTGCGGCATCCAGATCGGCCGGGGACCTACGTGCTGGCTGTCGAATGCGACGGCGCAGCATATCATAGCGCACTTTGGGCTCGCGAGCGGGACCGCCTTCGCCAGGACGTGCTCGAGCACCTCGGTTGGCGGTTCCACCGCATATGGAGCACCGACTGGTTCTACAATCGCCGTGCGGAGATCGAACGGCTTCGCCAGGCCCTCGTCGGGGCGCGGGAGGCTGCAGAGGTGGGCATTAAGGTCGATGGGGCTAATAAGTCCCGACCAGTGTCGCCGACAGCGGACGAACCCATTCCCGTTATTGCCATACCCGATATCGTTGAACGCCAGATGCCAGCGTATCAGCGGGCAGTTTTCCCGGTGACAAGTGCACTGGAGCCTCACGAGGTAAACACGGCGATCCTGGCTGATCTCGTCAAGCGGATCGTCGAGATGCATGACAGCCAGCTGTTGTCGGACGGGACATTTTGGTTCACCCGTGACCAAGCCGAGGCACCGCCTGTCAGGGATCGGTCTCTGGAATCCGGAGCGACTCTCAAGGCCGCCAATATCTCCACGCTCGAAGTTCAGGCTGCGCTTGCCATCGCTCGCACAGACAACGCCGGCGGCAATGACGCTGAGCTTGTTCGCAGCGCTGCTCGCCTATTGGGATTCAAACGCGTTGGACCCGACCTGCAATTGAGGATTTCAGACGTTCTGTGA
PROTEIN sequence
Length: 1520
MATVQDGEMAPSQARRGEVARLFDETRRRLVETGTRNRLVHVNRANTRGNVINVVNERSDDIHDILSGSKVMRFLALGRDKSDDDDEVHLATTMDEPDADRFTDWHLETRLGPDALQKKLLKIAREAQTAEEESGVNILYLALGFLTWFEDRNSGIEREAPLVLLPVELVRNPRTSTYDIRARDEEILTNLPLQQRLKDDFGIDLPEIDGEEEWKPSNYFERVEAVIASRDRWRVDRDAIQLGFFSFSKLLMYRDLDIESWPDEALADHPLTRGLLYEGFANEPPLFGPEDQLDDLLPPEQIFHVVDADASQAKVIEEVRSGRNLVVQGPPGTGKSQTITNIIATAAKDGKRVLFVAEKMAALSVVHDRLVKVGLRDVCLELHSRTANKKIVLAELARTISQASAIPQMPDAPHSLTSARDRLNGIAAALHEPIGSTGETAFSVLGRQVRYIGMEATPPVMDASPLLRLTRAEETALIETIERYGELLADEGVDAPHPFEGARNLDLQPVDLARLASVLTSAKTALEELAIAVEPAVNAIGLSQPVTLENADALIDVLSRLGGLPQGAAPIAVSMLDASDPVRLSELLRAGLDWRSEFDAQASNFTDAAFAHPVTSLRGSLIAGCDSFFARLGGAYRGASRELAGLLRGPLPKSAQERVALVDALSDVGSKRAVWETDQAYGERTLGDAWRGDRSDFPMLLSIAGWCDKLSQAKLKVAPLAATEMAASSEAPSMLHRLIEATNTARTKLAAATDVLDLDPATVSAERFEQAEVWSLVLRIGSMAAATDRYAGWVQLARMSGRMTAAGLAELADRMRTGAVSGSDAVVELRFARAEGLWRHALEQSPVLRELPMEKRHELVSTFAQLERNRLKDNVTDILAGHLAQVPQGAQGEMGVIRSEIGKKMRHLAIRRLFERAGTAIQRIKPVLLMSPISVAQYLPPSALTFDLLVIDEASQVRPEDALGAIARANQIVVVGDQKQLPPSSFFDRLAANDDADEDEPELLAGAAKVAAMESVLTLCEARGLGSRMLEWHYRSRDPSLIKVSNREFYEDGLILPPSPLQADPEFGLCFTQVAGVYDKGGKRDNRKEGEAIVSRVAEHARKHPSLSLGIVTFSFAQRNLITELLELARRSDTVLDAFMREGQSEDIFVKNIENVQGDERDVILVSVGYGPAVAGGRLTSMSFGPVNGEGGERRLNVLFTRARIRCEVFASFDPGDIDVSRTAGDGPRILKRFLEYAKTGQLEEHSPTGLGADTPFEEDVADVIRSLGFLADPQVGSAGFRIDIGVRHPDRPGTYVLAVECDGAAYHSALWARERDRLRQDVLEHLGWRFHRIWSTDWFYNRRAEIERLRQALVGAREAAEVGIKVDGANKSRPVSPTADEPIPVIAIPDIVERQMPAYQRAVFPVTSALEPHEVNTAILADLVKRIVEMHDSQLLSDGTFWFTRDQAEAPPVRDRSLESGATLKAANISTLEVQAALAIARTDNAGGNDAELVRSAARLLGFKRVGPDLQLRISDVL*