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cn_combo_scaffold_6622_9

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(8410..9159)

Top 3 Functional Annotations

Value Algorithm Source
Putative capsular polysaccharide export protein n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4TZU9_BORBO similarity UNIREF
DB: UNIREF100
  • Identity: 40.1
  • Coverage: 242.0
  • Bit_score: 171
  • Evalue 1.00e-39
wza; capsular polysaccharide export protein similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 242.0
  • Bit_score: 171
  • Evalue 3.80e-40
Polysaccharide biosynthesis/export protein {ECO:0000313|EMBL:KCB37649.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bo similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 239.0
  • Bit_score: 171
  • Evalue 1.10e-39

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Taxonomy

Bordetella sp. 8-296-03 → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
GGCATGGATCTCGGCCAGATCGAGAAGAAGATCTCCCAGCAAGTGGCGGCATCGGGCAAGGCTCAGGATCCGCAGGTGATCGTCGAGTTCGTTGCCGACCGCACCCACACCGTCATGGTCTCGGGCGATGTCAAGCAACCCGGGCGCATCTCGATGCTCGATGGCGTGCGGACCCTTGCCGAAGCCATCAGCCGCGCAGGCGGCCCGGTCGGCGGCAGTTCGCAGCCTGGCTTCGCTACGAGCCCGTCGAACCAGGTCGAGGTCGTGCTCCGCCGGCAGGGGCAGGTGATCCTTCAGACGCAGTATTCCGACCTGCTGGCTGGTCGCGACGTGGCACTCCAGAAGAACGACGAGATCGTCGTGCGCCCCAATTCGCGCGTCTACACCGTGCTGGGCGCCGTCATGAAGTCGGGCAACGTCGAGCTGTCAAAGCAGAATACCAGCCTGCTCGAGGCGCTGGGCACGGTCGGCGGTTTGGCCGATCAGCGAGCAAACAAAACGGGCGTTTATGTGTTCAGAATGGGGGATTTGCAGAAGAATCCCACAGCCCGGGCTCGCGTTTTTCGACTGGACCTCTACCAGCCAGTCTCTATTTTCATCGCGCAGCAGTTCCCGATTCAGGCTCGCGATGTCATCTACGTCACGAACGCACCGCTCTACGAGTACGACAAGATCCTGACTTCGATCTATCGCACGTTCTCGATTGTGGGTGTCGCGAGGGGCACGGTGATCCCGGCGACATCGTTCTGA
PROTEIN sequence
Length: 250
GMDLGQIEKKISQQVAASGKAQDPQVIVEFVADRTHTVMVSGDVKQPGRISMLDGVRTLAEAISRAGGPVGGSSQPGFATSPSNQVEVVLRRQGQVILQTQYSDLLAGRDVALQKNDEIVVRPNSRVYTVLGAVMKSGNVELSKQNTSLLEALGTVGGLADQRANKTGVYVFRMGDLQKNPTARARVFRLDLYQPVSIFIAQQFPIQARDVIYVTNAPLYEYDKILTSIYRTFSIVGVARGTVIPATSF*