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cn_combo_scaffold_7800_2

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(181..528)

Top 3 Functional Annotations

Value Algorithm Source
TnpC n=1 Tax=Pseudomonas putida RepID=V5WDY8_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 112.0
  • Bit_score: 100
  • Evalue 1.00e-18
Uncharacterized protein {ECO:0000313|EMBL:AID37284.1}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens. similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 112.0
  • Bit_score: 100
  • Evalue 1.50e-18
TnpA repressor protein similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 109.0
  • Bit_score: 92
  • Evalue 1.00e-16

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Taxonomy

Serratia marcescens → Serratia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGAGTTCGATCACGGAAGCGGAGTGGCAAACCCTTGAAGAGGGCCTCGATACAGCGGCGATCCTGGGCGCTGTGGACGCACTTGACCAGCTGCGTACCGAGGTGGGCAACCCCGGCGAAGGCGGGCTATCAGCGATTCGTGACGCGCTACTGCAGTTGCATCGACTGGCACAGGTGGCGCGCACGTCCGGTACGTCGGACAAGGTCAGTGAACTGTTCGACCTAGCCCAGGATTTGGAACTCCAGATCGGTGAATGGACGGAAGCGCTCGGCGCCATCCAGGCCACCTTGTCCGCGGTCACGGCGCTTTACCCGGAAAGCCTTGCATACGAAGACGGAGCGGCTTAA
PROTEIN sequence
Length: 116
MSSITEAEWQTLEEGLDTAAILGAVDALDQLRTEVGNPGEGGLSAIRDALLQLHRLAQVARTSGTSDKVSELFDLAQDLELQIGEWTEALGAIQATLSAVTALYPESLAYEDGAA*