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cn_combo_scaffold_8416_4

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 2972..3637

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00037ED999 similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 184.0
  • Bit_score: 127
  • Evalue 2.00e-26
TetR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 217.0
  • Bit_score: 346
  • Evalue 2.20e-92
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 194.0
  • Bit_score: 121
  • Evalue 3.10e-25

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGACCAGGCGCAAGCCAGGACGGGAGGAGGTCGAGGCATCTCCTGTCGTGGAGCGGGAATCGCGTGCGCCTGTCGAGGCGATCCGCGCGGCTGCCTTCGCCCAGTTCGCCGAGCGCGGCTATCCAGTGGTGACGGTTCGCGACATCATGAAGGCCTGCGGTCTCACGCAGGGCGCGCTCTACAACCACTTCAAGTCGAAGGACGAGCTGCTGCACGACATCATCACGTCGACGCAGAGCGAGCTGGAGCGGCAATGCAAGCAGGCCGTCGCCGGGGCGGGCGACGATCCCCGCGCCAAGCTCGCAGCCTTCGTACGCATCTATGTGATGCGGCATTGTCGCCTCAGGGTCGAGGCACTGGTCGCCAACCGCGAGATCGGCTGGCTGGACGGTGAACGCGTTGCCGATATCCGCCGCAGCCGCCGCGCCATTCGCGACATCCTGGTCTCGATCTTCGTCGACGGCGTGAAGCGCGGCGTCTTCGAGCCGCCCCAGGTCGACGGCAGGAACGATCTCAAGACGATTGCCATGGCGCTCCTCGACCAATGCACCCACGTCTCCATGTGGTATGGTCCCGGCGGCGATCTGACCGAGGAGCAGATGGCCAACCTCTACGCCGACATGGCCTTACGCATGGTCGGCGCGCAACCATTGCCGCCGACGTAA
PROTEIN sequence
Length: 222
MTRRKPGREEVEASPVVERESRAPVEAIRAAAFAQFAERGYPVVTVRDIMKACGLTQGALYNHFKSKDELLHDIITSTQSELERQCKQAVAGAGDDPRAKLAAFVRIYVMRHCRLRVEALVANREIGWLDGERVADIRRSRRAIRDILVSIFVDGVKRGVFEPPQVDGRNDLKTIAMALLDQCTHVSMWYGPGGDLTEEQMANLYADMALRMVGAQPLPPT*