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cn_combo_scaffold_8954_1

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 1..405

Top 3 Functional Annotations

Value Algorithm Source
rimK; RimK family alpha-L-glutamate ligase id=12498406 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 135.0
  • Bit_score: 270
  • Evalue 6.80e-70
Alpha-L-glutamate ligase, RimK family {ECO:0000313|EMBL:EIC31171.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 125.0
  • Bit_score: 138
  • Evalue 9.60e-30
RimK family alpha-L-glutamate ligase similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 120.0
  • Bit_score: 137
  • Evalue 2.50e-30

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Taxonomy

Methylomicrobium album → Methylomicrobium → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
GCCGACTACCGCGACGTCTACTATCTGCAACGCTTCATCGGCCCGGCCGCCGGCCCGTCGGAAGACTATCGCGTGCTCGTGGCCGGCGGCAGCGCACGCGCCGCCATGACGCGCCGGGGTGCAAGCTGGATCAACAACGTGGCCCAGGGCGCGCGCTGCCTGCCCGCGCCGGACGATGCGGAACTGATGCGGATGGCCGAAGCCGCCACGGCCGCACTCGGCATGGATTACGCCGGCGTCGACCTGATGCGTGACCGTGACGGCCGGCTCGCAGTGCTGGAAGTCAACAGCATTCCCGCCTGGCGCGGCCTGCAGAACGTGGCGCCGCAGGATATCGCACGCATCCTGGTCGACGACTTCCTCGACCGCCACGTCGAAGCCGGGTTGCGGAGACAGTGCGCATGA
PROTEIN sequence
Length: 135
ADYRDVYYLQRFIGPAAGPSEDYRVLVAGGSARAAMTRRGASWINNVAQGARCLPAPDDAELMRMAEAATAALGMDYAGVDLMRDRDGRLAVLEVNSIPAWRGLQNVAPQDIARILVDDFLDRHVEAGLRRQCA*