ggKbase home page

cn_combo_scaffold_10287_5

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 5074..5943

Top 3 Functional Annotations

Value Algorithm Source
5-carboxymethyl-2-hydroxymuconate Delta-isomerase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU23_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 280.0
  • Bit_score: 358
  • Evalue 9.10e-96
5-carboxymethyl-2-hydroxymuconate delta-isomerase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 289.0
  • Bit_score: 549
  • Evalue 3.00e-153
5-carboxymethyl-2-hydroxymuconate delta-isomerase similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 280.0
  • Bit_score: 358
  • Evalue 2.60e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGAGCGTTCTGGAAGGGCCGCGCAAGGAGGTCCGTCGCGTCATGCGGGGCGGCAGCGCCTATTGGGTGGAGTTCAGGGACGGCAGGATCGTCTTCGCCGACGGCCGCACCTGCGACGAGAAGGACGTGGTTCATCTGCCGCCGTGCAGCCCGACCAAGATCCTGTGCGTGCACGTCAACTACATCTCGCGCTACTACGAGTTCAACAACACGCGCGTACCGCCCAAGACGCCGACCTATTTCCAAAAGCCGCTGACCGCGCTCAACGCCCACAGGGGCGAGCTGGTGAAGCCCGAGGGCTATACCTACGTGAACTACGAGGGCGAGATGGCCGTCGTGTTCGGCAAGGTCACCAAGAACGTGACGCGCGAGGAGGCGTGGGACTGCATTGCAGGCTTCGCCCCGGCCAACGATTTCGGCTGCCACGATTTCCGCGACACCGACAGCGGCTCGATGCTGCGGGTAAAAGGCATGGACGGTTTCTGTCCCATCGGGCCGGGTCTCGTCTCCGGCGTCGACGTGCGCCAGTCGACCCTGCGCAGCTACAAGAACGGCAAGATGGTGCAGGAGGGCGCGGTCAGCGAGCAGATCTTCGACTGCGGCTACCTGATCGCCGACCTCGCCCGCCACATCACCTTCCTGCCGGGCGACATCCTGCTGACCGGCACGCCGGCCAACTCGCGGCCGCTGCAGGCGGGCGACACGATCGACGTCGAAGTGACGGGCGTGGGGCGGCTCTCCAACACGGTCGTCGAGACGCCGGCGCCGCGTTCGGCCGACGGCTTCCCGCCCAGTCCCGACAGCGAGGGCGTGCGCAGGGTGGCGCTCGGCAACGAGGAGCGCCTGCCCGACAAGTTCAAGAGCAAGTAG
PROTEIN sequence
Length: 290
MSVLEGPRKEVRRVMRGGSAYWVEFRDGRIVFADGRTCDEKDVVHLPPCSPTKILCVHVNYISRYYEFNNTRVPPKTPTYFQKPLTALNAHRGELVKPEGYTYVNYEGEMAVVFGKVTKNVTREEAWDCIAGFAPANDFGCHDFRDTDSGSMLRVKGMDGFCPIGPGLVSGVDVRQSTLRSYKNGKMVQEGAVSEQIFDCGYLIADLARHITFLPGDILLTGTPANSRPLQAGDTIDVEVTGVGRLSNTVVETPAPRSADGFPPSPDSEGVRRVALGNEERLPDKFKSK*