ggKbase home page

cn_combo_scaffold_11109_3

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1828..2460)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KY58_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 208.0
  • Bit_score: 258
  • Evalue 7.10e-66
Putative HTH-type transcriptional regulator ycjC {ECO:0000313|EMBL:GAJ37562.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 194.0
  • Bit_score: 270
  • Evalue 1.50e-69
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 182.0
  • Bit_score: 211
  • Evalue 2.80e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DOA9 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
TTGAACAAACTGTCCAACAGGCCGGGCCTGGCCGAAACAGGCGACGAGACGGTACGGGTTGCCGATCTGGTCAACCTGGACGGCCGCATCGGCCAGGACATGAAGGGACTGCGCAAGGCGCGCGCCATGACGCTCGATGCGCTGGCCAAGGCATCGGGCCTGTCGCAAGGCTATCTCAGCCAGATCGAACGCGGCCTGGCCAGCCCGTCGGTGAAGGCGCTCTATTCGATCAGCCGGGCGCTCGGGGTGACCGTGAGCTGGTTCTTCCCGCCCGCCGGCAGCGACGGCGAGGCGCTGCGGGATTTCGTCGTGCGGAGCGACACGCGCAGGAAACTGCACTATGCCAACGGCATCGTCGACGAGTTGCTCTCCCCCAACCTCGACCGGCAGTTGGAGCTTCTGCACTGCACCTTTCCGCCCGGCACCCGGAGCGGCGAGACGCCCTATACCCATGCCGGGGAGGAGGCCGGCATCGTGCTTTCGGGCCGGCTCGACCTTTGGATCGACGAGAAGCACGCCGTCCTCCACGCCGGCGACAGCTTCGCCTTCGCCAGCGACACGCCGCACCGCTACGCCAACACCGGCGACGAGGAAACCGTCGTGGTCTGGGTCATCACGCCGCCGACCTATTGA
PROTEIN sequence
Length: 211
LNKLSNRPGLAETGDETVRVADLVNLDGRIGQDMKGLRKARAMTLDALAKASGLSQGYLSQIERGLASPSVKALYSISRALGVTVSWFFPPAGSDGEALRDFVVRSDTRRKLHYANGIVDELLSPNLDRQLELLHCTFPPGTRSGETPYTHAGEEAGIVLSGRLDLWIDEKHAVLHAGDSFAFASDTPHRYANTGDEETVVVWVITPPTY*