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cn_combo_scaffold_12208_5

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(4128..5231)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilB n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IH10_PHYMF similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 364.0
  • Bit_score: 416
  • Evalue 3.60e-113
pilB; type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 364.0
  • Bit_score: 416
  • Evalue 1.00e-113
Type IV pilus assembly protein PilB {ECO:0000313|EMBL:BAM04548.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphae similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 364.0
  • Bit_score: 416
  • Evalue 5.00e-113

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Taxonomy

Phycisphaera mikurensis → Phycisphaera → Phycisphaerales → Phycisphaerae → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1104
GTCCTCGGCCCAGATGGTCAGCAGACGCTGCAGTTGCGCTACCGAATTGACGGATTGTTGCAGGAGAAACCGCCACCCCCGAAGCATCTTCATCCCGCTCTCGTATCGCGCATCAAAATCATGGCGGATATGAATATCGCCGAGCGGTACCTGCCGCAGGACGGGCATATCCAGATTCATCATCGGGGTTCACGGGTGGACATACGTGTGGGGAGCATGCCGACGATCCATGGCGAGAGTCTTGTGCTGCGGTTGCTGGAAAAGAACTCAAGGCTGCTCACGCCAAGGGAACTCGGGCTGGACCCGGTTCGTTCTGATCTGCTCGCTCGTCTCGTGGGCAAACCGCATGGCCTTTTCCTCACCACTGGACCGACGGGAAGTGGGAAAACCACAACGCTCTACTCCATCCTGAGCAGCATTTATACGCCGGAGAAGAAAATCCTGACCATTGAAGACCCGGTGGAATATGAACTGACGGGAGTTGCGCAAATACCAGTCAAACCGAGCCGAGGGTTTACGTTTGCGACCGGCTTGAGAGCGATCCTGCGCCAGGATCCCGATGTGGTGATGGTGGGGGAAATCCGCGATTCAGAAACGGCGGAAATCGCGATCCGGGCAGCACTCACGGGCCATCAAGTGTTCAGCACATTGCACACAAACGATTCGGCGGGAGCGGTGACGCGCCTGATCGACATGGGGGTGGAGGCATTCCTGATCTCATCTTCATTGGAAGGCGTTTTGGCGCAACGCCTGGTGCGCCGGATTTGCGAACATTGCCGAAGTGAAGCGCCGGTTGCCACGTCGGTTCGCGAGAAACTTGAGGCGATGAGTGGCCGTCCGCTGAGCGGTATTTTTTATGCGGGCAAAGGGTGCGATGAATGCCGGGGAACCGGTTATCGCGGGCGGGTGGGAATTTTCGAACTGCTCGCCATCACGCCGGAATTGCGGGAAATGATTTTGCAGCGCCGGTCGAGCGCGGAGCTGAAACAATTCGCGCAAAAATCGATGATTACCATGGCCCAGGATGCATTCCAGAAAGCATCCGCGGGCGAAACGACCCTTGAAGAAATTGTGCGGGTAACTGCGGGAGATCAGCTTGAATGA
PROTEIN sequence
Length: 368
VLGPDGQQTLQLRYRIDGLLQEKPPPPKHLHPALVSRIKIMADMNIAERYLPQDGHIQIHHRGSRVDIRVGSMPTIHGESLVLRLLEKNSRLLTPRELGLDPVRSDLLARLVGKPHGLFLTTGPTGSGKTTTLYSILSSIYTPEKKILTIEDPVEYELTGVAQIPVKPSRGFTFATGLRAILRQDPDVVMVGEIRDSETAEIAIRAALTGHQVFSTLHTNDSAGAVTRLIDMGVEAFLISSSLEGVLAQRLVRRICEHCRSEAPVATSVREKLEAMSGRPLSGIFYAGKGCDECRGTGYRGRVGIFELLAITPELREMILQRRSSAELKQFAQKSMITMAQDAFQKASAGETTLEEIVRVTAGDQLE*