ggKbase home page

cn_combo_scaffold_12224_2

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(816..1718)

Top 3 Functional Annotations

Value Algorithm Source
AraC-type transcriptional regulator domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXI9_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 300.0
  • Bit_score: 343
  • Evalue 2.40e-91
Transcriptional regulator, AraC family {ECO:0000313|EMBL:KFC65470.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. L similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 291.0
  • Bit_score: 363
  • Evalue 2.40e-97
AraC-like transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 300.0
  • Bit_score: 343
  • Evalue 6.80e-92
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGGATCGCATGGATGAGCTCAAGAGCCTGATTGCACAGTTCGCAACCGCCGATGGTATTCAGGCAACGCCGATGCAAGGCATGTCGCTGGTCAGGATCTCGCATCCCTCCGAGCCGATGCATGCTGTGCACCACCCGGCGCTCTGCATCGTGGCGCAGGGCAAGAAGCGGGTGATCGCCGGCGACCGCGTGCTCAACTACGATGCGGCGAACTTCCTCGTCGTCTCCGTCGACACGCCGGTCATCGGCCAGGTGGTCGAGGCGACCCCGGACCAACCCTATCTCTGCATGAAGCTCGAGCTCGACGCCGCCGAGATCGGCGCGCTGCTGATCGAGGTGGGGGGCGTCACCGCTGCCGCGGCGGCCGAGGCCGAGCCCAGCGTCACGGTGAGCCCGATCATGCCCGAACTGCTCGACGCGGCGATCCGGCTGGTCAAGCTGCTCGAGCGGCCGGAGGATCTGGCGGTGCTCGGCCCGATGGTGAAGCGCGAGATCCTTTACCGGCTGCTGCGCTCCGATCAGGCAGTCAAGCTGCAGCAGATCGCGCTGGCCGAAAGCCGCCTGCAGCAGGTCAACCGCGCCATTGGCTGGATCAAGCTCAACTACCGCGACGCCTTCGCCATCGAGACAGTGGCCGCCGAGGCGCGGATGAGCCCTTCGGCGCTGCACCTCCACTTCAAGGCAGTGACGGCGATGAGCCCGCTGCAATACCAGAAGCAATTGCGGCTGCAGGAAGCGCGCCGGCTGATGCTGTCCGAAGCGCTCGATGCGGCGACGGCAGGTCATCGCGTCGGCTATGACAGCCCCAGCCAGTTCAGCCGCGAATATGCCCGCACCTTCGGCGCGCCGCCCTTGCGCGACGTGGCGCGGCTGAAGGCCGGCGACCTGCTCTCGGCCGGCTGA
PROTEIN sequence
Length: 301
MDRMDELKSLIAQFATADGIQATPMQGMSLVRISHPSEPMHAVHHPALCIVAQGKKRVIAGDRVLNYDAANFLVVSVDTPVIGQVVEATPDQPYLCMKLELDAAEIGALLIEVGGVTAAAAAEAEPSVTVSPIMPELLDAAIRLVKLLERPEDLAVLGPMVKREILYRLLRSDQAVKLQQIALAESRLQQVNRAIGWIKLNYRDAFAIETVAAEARMSPSALHLHFKAVTAMSPLQYQKQLRLQEARRLMLSEALDAATAGHRVGYDSPSQFSREYARTFGAPPLRDVARLKAGDLLSAG*