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cn_combo_scaffold_4173_9

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 7179..8114

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JHZ8_PSEST similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 311.0
  • Bit_score: 590
  • Evalue 1.20e-165
lysR5; putative HTH-type transcriptional regulator ywbI similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 311.0
  • Bit_score: 590
  • Evalue 3.30e-166
  • rbh
Putative HTH-type transcriptional regulator ywbI {ECO:0000313|EMBL:CDM40502.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Ps similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 311.0
  • Bit_score: 590
  • Evalue 1.60e-165

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGGACATCCGTCATCTCCGCTCGTTCGTCACGGTTGCAGAAAATCTGCACTTTTCACGCTCTGCTGAGCAGCTTGGGCTATCTCCCCCGACATTGACTGCGCAGATTCAGGAAGTCGAACGCTTGTTGCAGGCGCGGCTGTTCAATCGAACAAAGCGGTCAGTCAGCTTGACACCTGCTGGAGAAGCCTTCTTGACGGAAGCGCGCGCTACCCTCGAGCAACTTGATAGGGCGATCCACGTGGGCCGCCGTGCCGGTCGCGGCCAAGTCGGAAGAGTGGAGATCGGCTATGTGGGTTCAGCAGCCTTCTTCGGAGTACTCCAGGACCAAGTTCAGCGATTTCGCAATCAATGGCCTGACGTCATGGTAAACACAAAGGAGTTCCCAACCGACCAACTCACGACCCTCCTTGAGGAAGGCAGAATCGATGTGGCCCTTGTCCGGACGCCTGTGCTCCTGCCACCTTCGATCTCAAGCCATATCCTGGCACGAGACCGATTCTGCTTGGCTCTGCCGGCAGACCACATCTTGGCCCAGACGCCCAGTGACATTCATCCGCGGGCACTAGCGAACGAGTCGTTTGTGGTTCCGGAGCAGGCGCTGGGACTGCGCGAGGTGGGTAAGCGCGGGAGATTCAATCCACATATCGTCTCGGCCCCTGGAACTTTGGTTGCGGTGCTGACGCAGGTGGCGCTTGGTGTGGGCGTTGCGGTCATTCCCAGTATCTTGACCCAAATCATCCAACTGCCGAATGTGTTTTACAGGGAGATCTCTGGACCTGCCATTACCTCGGAGGTGGAGGCGTTATTTCGACGACATGAGCGACTGCCGACTGTGCGCAACCTTATCGGCCAAATACTCGAGACCGACGCAAGCCTGTGGAAAGCAGGGTTTCCGCAAAGTATGCAGATCAACTGCCCTAAACAGAACGCTTAG
PROTEIN sequence
Length: 312
MDIRHLRSFVTVAENLHFSRSAEQLGLSPPTLTAQIQEVERLLQARLFNRTKRSVSLTPAGEAFLTEARATLEQLDRAIHVGRRAGRGQVGRVEIGYVGSAAFFGVLQDQVQRFRNQWPDVMVNTKEFPTDQLTTLLEEGRIDVALVRTPVLLPPSISSHILARDRFCLALPADHILAQTPSDIHPRALANESFVVPEQALGLREVGKRGRFNPHIVSAPGTLVAVLTQVALGVGVAVIPSILTQIIQLPNVFYREISGPAITSEVEALFRRHERLPTVRNLIGQILETDASLWKAGFPQSMQINCPKQNA*