ggKbase home page

cn_combo_scaffold_4173_15

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 15981..18998

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=7 Tax=Proteobacteria RepID=O05615_PSESP similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 999.99
  • Bit_score: 1971
  • Evalue 0.0
Transposase {ECO:0000313|EMBL:CAA67455.1}; TaxID=306 species="Bacteria; Proteobacteria.;" source="Pseudomonas sp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 999.99
  • Bit_score: 1971
  • Evalue 0.0
tnpA; Tn4652, transposase similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 998.0
  • Bit_score: 1936
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3018
ATGGCTTCGGTGGAAAGGACAGCCTACCCGCTCTTGCCCAGTCAGTTGCCAGCTAAGGAGCTGCATCGATGCTATTCCCTGTCTGATTCAGAGATCGAATGGGTCAATAACACCGCTAAGAGTCCAGCGCTATCGATTGGGCTGGCAATCCAACTAAAGGTGTTTCAGCAGCTACACTATTTTGTTCCGTTCGAGGAGCTTCCTCAGGAGCTCATCAGTCATGTCCGACAATGCCTTCGCTACGGCGCACGAATAGCTCCGCGCTACAGCAACCCCCGCACCCTTTACCGACACCAAGCGGCGGTTCGGCAGTACCTGCAGGTTACACCCTTCTATAGCAGCGACGGGCTAGCGATCACTGAGGAAATCGCACGTGACTGCGCTGTAGTGCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACATCGCAGAAACCGCTTTGGCGAGTGCTCAGGAAGTTACCTTCAACCTGATCGTGCTCCGAGCGCCAATCGAGGTGATCTACAAGCTAAAGGAGCTGCTCGACACGGATTTCGGGCGTCGGCAGAGTGACTTCAACGCACTCAAGCAGGCACCCAAGAAGCCTTCCCGCAAGCACCTGGAGGTGTTGATCGACCACCTGGCGTGGTTAGAGAGCTTCGGAGATCTGGATGCCATTCTTGAGGGGGTCATCGATGCTAAGATCCGCCACTTCGCCACCCAAGCCGCCGCGTCGGACGTCGCCGAGCTGAAGGACTGCTCGCTGCCGAAACGCTACACACTGATGCTGGCCTTGATCTATCGGATGCGGGTGCGAACTCGGGATCACCTGGCCGAGATGTTCATCCGACGGATTTCGACGATCCACAAACGCGCCAAGGAGGAGTTGGAGCAAATCCAGGCGCGGCAACGCCAGAAGCTGGAGCAACTGGCGGCCACCCTGGATGGCGTGGTGCAGATTCTTGTTCAGGAACCGGATGACCAGGAGGCTGGCAGTCTGATCCGGGAATTCCTCTCTCCCGATGGCAACCTGGATCGGTTGCGCGAGACTTGCGCCGAAGTCCAGGCTACGGGCGGTAACAACTACCTGCCGCTGATCTGGAAGCACTTCAAGTCCCATCGCTCGCTGTTGTTCCGTCTGAGCCACCTTCTTCAACTGGAACCCACGACTCAGGATCGCTCACTTATCCAGGCGCTTCAGCTCATCCAGGACAGCGAAAATCTACACCGCGAGTGGATCGACGAGCATGTCGACTTGTCGTTTGCGTCGGAGCGCTGGGTTAAGGTCGTGCGTCGTCCTGCCAGTGAAGGGCCACCTACCAACCGGCGCTATCTGGAAGTCTGCGTGTTCTCTTACCTGGCCAGTGAGCTGCGCTCGGGTGATATGTGCGTGCTGGGGTCGGAATCTTTCGCCGACTACCGTAAGCAGTTGCTGCCCTGGGAAGAATGTTTCCATCGTCTACCGGCCTACTGCGAAAAGGTGGGGCTGCCTGGCACGGCGAAGGAGTTTGTCGCCTCCCTCAAGATTCAGCTGGAGGAAACCGCGCAGCATCTGGATGAAAAATTCCCTTCTTGCCGAGGTGACGTATCGATCAATGAAGCCGGCGAACCGGTGCTACGCCGAGTGATAGCGCGGGACATCCCGCCTTCGGCCATCTCGCTACAGACGGCGCTTATGCAGCGCATGCCGGCCAGGCACGTGCTCGACATCATGGCCAACATTGAGCATTGGATTCAGTTCACTCGGCATTTCGGGCCGATGTCCGGCAACGAGCCAAAGCTCAAAGAACCGGCCGAGCGCTACCTGATGACGATCTTCGCCATGGGCTGCAACCTTGGCCCCAACCAGGCCGCACGGCATCTGGCCGGTAATGTCACGCCGCACATGCTGTCCTATACGAATCGCCGTCACCTCTCGCTGGAGAAGTTGGACAAAGCTAACCGCGAGCTGGTGGAGCTCTACTTGCAACTTGACCTGCCCAAGCTCTGGGGCGATGGCAAGGCGGTGGCTGCGGACGGCACGCAGTTCGACTTCTACGACGATAACCTGCTGGCCGGCTACCACTTCCGCTACCGCAAGATGGGGGCCGTGGCCTATCGACACGTGGCCAACAACTACATCGCCGTGTTCCAGCACTTCATCCCGCCGGGCATCTGGGAGGCGATCTACGTGATCGAGGGGTTGCTAAAAGCTGATCTCAGTGTCGAGGCAGACACTGTGTATTCCGATACTCAGGGGCAATCGGCGACGGTCTTTGCCTTCACCCATCTGCTGGGCATTAATCTGATGCCACGTATTCGCAACTGGCGCGACCTGGTGATGTGCCGGCCGGATCGCGGCGCTTCGTACAAGCATATCAACCGCCTGTTCACCGACACTGCCGACTGGAACATGATCGAAACCCACTGGCAGGATCTGATGCAGGTAGCGCTGTCTATCCAGGCCGGCAAAATCTCCTCGCCTATGTTGCTGCGAAAACTCGGCTCCTACAGCCGGCGCAACAAGCTCTACCATGCGGCACAAGCACTGGGCAGCGTGATCCGCACGATCTTCCTTCTCAACTGGATCGGCAGTCGCGAGCTGCGCCAGGAAGTCACCGCGAACACCAACAAAATCGAGTCCTACAACGGATTTTCCAAGTGGTTGTCCTTCGGCGGTGATGTGATTGCCGAAAACGATCCGGACGAACAGCAAAAACGCCTGCGCTACAACGACATGGTGGCCTCATCGGTGATCCTGCAGAACACTGTAGATATGATGCGCATCCTGCAGAAATTGGCCCGAGAGGGTTGGCAGTTCACCGACGAGGACGTGTCCTTCCTCAGCCCCTACTTGACCAGCAACGTCAAGCGCTTCGGCGAATTCAACCTCAAGCTAAACCGGCCACCGGAGCCCTGGATCAAGGACTCGGTGTTCCAACAAGCTGCCGGCTCGCTGCGAGTGATCAGACCTAGCCAGCTAGATACCGAGAAAACGCCATGA
PROTEIN sequence
Length: 1006
MASVERTAYPLLPSQLPAKELHRCYSLSDSEIEWVNNTAKSPALSIGLAIQLKVFQQLHYFVPFEELPQELISHVRQCLRYGARIAPRYSNPRTLYRHQAAVRQYLQVTPFYSSDGLAITEEIARDCAVVLEQRVDLINAMLDELIQRGYELPAYSTLNNIAETALASAQEVTFNLIVLRAPIEVIYKLKELLDTDFGRRQSDFNALKQAPKKPSRKHLEVLIDHLAWLESFGDLDAILEGVIDAKIRHFATQAAASDVAELKDCSLPKRYTLMLALIYRMRVRTRDHLAEMFIRRISTIHKRAKEELEQIQARQRQKLEQLAATLDGVVQILVQEPDDQEAGSLIREFLSPDGNLDRLRETCAEVQATGGNNYLPLIWKHFKSHRSLLFRLSHLLQLEPTTQDRSLIQALQLIQDSENLHREWIDEHVDLSFASERWVKVVRRPASEGPPTNRRYLEVCVFSYLASELRSGDMCVLGSESFADYRKQLLPWEECFHRLPAYCEKVGLPGTAKEFVASLKIQLEETAQHLDEKFPSCRGDVSINEAGEPVLRRVIARDIPPSAISLQTALMQRMPARHVLDIMANIEHWIQFTRHFGPMSGNEPKLKEPAERYLMTIFAMGCNLGPNQAARHLAGNVTPHMLSYTNRRHLSLEKLDKANRELVELYLQLDLPKLWGDGKAVAADGTQFDFYDDNLLAGYHFRYRKMGAVAYRHVANNYIAVFQHFIPPGIWEAIYVIEGLLKADLSVEADTVYSDTQGQSATVFAFTHLLGINLMPRIRNWRDLVMCRPDRGASYKHINRLFTDTADWNMIETHWQDLMQVALSIQAGKISSPMLLRKLGSYSRRNKLYHAAQALGSVIRTIFLLNWIGSRELRQEVTANTNKIESYNGFSKWLSFGGDVIAENDPDEQQKRLRYNDMVASSVILQNTVDMMRILQKLAREGWQFTDEDVSFLSPYLTSNVKRFGEFNLKLNRPPEPWIKDSVFQQAAGSLRVIRPSQLDTEKTP*