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cn_combo_scaffold_4173_16

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 18995..19357

Top 3 Functional Annotations

Value Algorithm Source
TnpA repressor protein n=6 Tax=Pseudomonas RepID=I4CZN6_PSEST similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 119.0
  • Bit_score: 217
  • Evalue 6.10e-54
TnpA repressor protein {ECO:0000313|EMBL:CEG51691.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthom similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 120.0
  • Bit_score: 228
  • Evalue 6.30e-57
tnpA repressor protein TnpC similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 119.0
  • Bit_score: 217
  • Evalue 1.70e-54

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Taxonomy

Pseudomonas xanthomarina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGATCAACATTCCTCCCGCATCCTTCCGCCTTACACCGTACGGCGAAGTGGACGCCGTGGCGTTGGAAAACCTGCGCGACAGCTTCGACACCTCTCAACTGCTCCGGCTGGTTGATCGATTGGACGTCTGCTTGGTGGAACTGGGTGGAATCACCTCCATTCGCGACGAGCTGCTGAGATTGCATGCGATGGCTCTGACGATATTTGAGGGCATCGCTCTTACGGTGCCTGCCGAGAGTGCTTGTATCTGGGCAGAAGCCGAATCTCTACAAATGGATCTTGAGGCGTTGATTTCCTGGGCTCGTGCTGCTCAGCCCCTCATTGCGCCGCTGATCGATCTTGCACCAAACCACGATCCATGA
PROTEIN sequence
Length: 121
MINIPPASFRLTPYGEVDAVALENLRDSFDTSQLLRLVDRLDVCLVELGGITSIRDELLRLHAMALTIFEGIALTVPAESACIWAEAESLQMDLEALISWARAAQPLIAPLIDLAPNHDP*