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cn_combo_scaffold_4461_6

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(4268..5005)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: neurogenic locus notch homolog protein 1-like, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E474B0 similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 862.0
  • Bit_score: 334
  • Evalue 2.70e-88
Membrane protein {ECO:0000313|EMBL:ETD48020.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa V similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 245.0
  • Bit_score: 446
  • Evalue 1.80e-122
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 237.0
  • Bit_score: 388
  • Evalue 1.10e-105

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGTACGAAAGATTAAATAAAGCAATGGCAAGCCGCCATCCATCAACTTGGGCAAGGATTCTTCTCTTTCTAACAGCAACGCTTCTCCTCATGTTCGCAAGCGCGAATCAGGCACTGGCTCATGCTGTTGCCGAGGGCGATAAGGGTTACATCCAAGAAATATCTGGCATCAATATCATCCCCTTCATGTATCTAGGGGCGAAGCATATGGCGACGGGGTACGACCATATTCTGTTCCTGCTCGGCGTGATCTTTTTCCTATACCGGATGAAGCATGTCGCCCTGTATGTGACGCTATTTGCTATCGGCCACTCGACCACGATGCTGCTTGGCGTTTATTTCAATGTCGGAATCAACAGCTACATCATCGACGCGATCATTGGCCTTTCGGTTGTTTATAAGGCGCTCGACAACATTGGTGCCTTCCAACGATGGCTTGGCTTTCAACCCAATACGAAAGTCGCAACGGTTGTATTCGGGCTTTTCCACGGATTCGGCCTATCAACCAAGATCATCGAATACAACATTTCACCTGACGGCCTGATTCCCAACCTGCTGGCATTCAATGTCGGCGTTGAAATCGGACAGTTGCTTGCGCTCGGTACGATCCTGATCGTAATGAGTTACTGGCGCCGAACAGCGAGCTTCTGGCGTCATGCGTACACCGCAAACGTGGCAATGATGTGTGCCGGCTTCATTCTAATCGGCTACCAAATCACCGGCTACTTCGTTTCTTGA
PROTEIN sequence
Length: 246
MYERLNKAMASRHPSTWARILLFLTATLLLMFASANQALAHAVAEGDKGYIQEISGINIIPFMYLGAKHMATGYDHILFLLGVIFFLYRMKHVALYVTLFAIGHSTTMLLGVYFNVGINSYIIDAIIGLSVVYKALDNIGAFQRWLGFQPNTKVATVVFGLFHGFGLSTKIIEYNISPDGLIPNLLAFNVGVEIGQLLALGTILIVMSYWRRTASFWRHAYTANVAMMCAGFILIGYQITGYFVS*