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gwd2_scaffold_2788_10

Organism: GWD2_OD1_43_10

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 6673..7236

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase, sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYC2_FULL_RIF_OD1_03_42_11_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 363
  • Evalue 1.50e-97
ECF subfamily RNA polymerase, sigma-24 subunit KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 176.0
  • Bit_score: 112
  • Evalue 1.20e-22
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 112
  • Evalue 1.00e+00

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Taxonomy

RIFOXYC2_FULL_RIF_OD1_03_42_11_curated → RIF-OD1-3 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGACCAAGCCGAACGACAAGCCATTGCTGCCTGCCAAACAGGCGAGTTAACGCAGTTTACCCTGCTCTATGAACGCTATATAGAGAAGATTTATCGTTTTGTTTATTTTAAGACCCTCCATCAAGAAACGGCTGAGGATTTAACTTCTTTTACTTTCATGAAAGCGCTGGAGCATATCGCAGATTATGATGTGGCTCGAGGCAATTTTTCTTCCTGGCTTTACCGCATTGCCCAAAATACGGTGATAGATCATTATCGCACTACCAAGCAGGAGGTTGATATTGAACAAGTGTTCAATTTGGCTTCAGGGCAGAATGTGGCCGCGGAAACTGAGGTTAGTCTGGCCTTACAAGAAGTGCAAACTTATCTTAAATCATTGGAGCCGGATACTCGCGAGCTTATAATCATGCGCCTTTGGCAAGGTTTGTCTTATCAAGAAATAGCTGAGCTTACCGGCAAAAGTGAAGGGGCTTTGAAAATGGCAGCCTCACGCGCTTTAAAGCAGTTACGCTCCAGTGTTTCCGCCGCTACTCTCTTATTAATTTTTGGGAGCTTAAATTAG
PROTEIN sequence
Length: 188
MDQAERQAIAACQTGELTQFTLLYERYIEKIYRFVYFKTLHQETAEDLTSFTFMKALEHIADYDVARGNFSSWLYRIAQNTVIDHYRTTKQEVDIEQVFNLASGQNVAAETEVSLALQEVQTYLKSLEPDTRELIIMRLWQGLSYQEIAELTGKSEGALKMAASRALKQLRSSVSAATLLLIFGSLN*