ggKbase home page

RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_5

Organism: Gammaproteobacteria bacterium RIFCSPLOWO2_01_FULL_47_190

near complete RP 45 / 55 MC: 1 BSCG 44 / 51 ASCG 7 / 38
Location: comp(4174..4698)

Top 3 Functional Annotations

Value Algorithm Source
tyrosine recombinase XerD n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000369E88C similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 158.0
  • Bit_score: 145
  • Evalue 4.30e-32
tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 148.0
  • Bit_score: 292
  • Evalue 4.00e-76
tyrosine recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 127.0
  • Bit_score: 144
  • Evalue 2.10e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gammaproteobacteria_47_11 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGAAGGTGCCGGCTGACAAAACGGTGGAATATCCATTTCAGCATGAATCCGCGGAAATGGTTAACCGTTTTCTGGATATGTTATGGATGGAGAGGGGCCTGAGTGAAAATACTCTTTCTGCCTATCGAAGCGATCTCCTGGCCTATGCGCGCTGGCTGAATCAAAAAGGTGTCAGGCTTGGTGAGGCCCAGGATGCGGATCTGCGGGATTATCTGGGCAGCTTTAAACAACCTGCGGCAAGGACACTGGCCAGGCGTTTATCGAGTCTTCGTCGTTTTTATATATATTTAGTTCGTGAAGGCCTGATGCAGCATGATCCCAGTGCCAGAGTTGAATCCCCGCGTATTGGCAGACCGCTGCCGAAATCATTGACTGAAGCAGAGGTAGAGGCCTTACTCAATGCGCCGGACATAAATACATCTCTGGGTTTGCGCGACAGGnnnnnnnnnGGCCATGCTGGAAGTCCTGTATGCCACAGGTTTGCGGGTATCCGAGTTAACCGGCTTAACACTCACTCAAATTAA
PROTEIN sequence
Length: 175
MKVPADKTVEYPFQHESAEMVNRFLDMLWMERGLSENTLSAYRSDLLAYARWLNQKGVRLGEAQDADLRDYLGSFKQPAARTLARRLSSLRRFYIYLVREGLMQHDPSARVESPRIGRPLPKSLTEAEVEALLNAPDINTSLGLRDRXXXGHAGSPVCHRFAGIRVNRLNTHSN*