ggKbase home page

RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_137159_5

Organism: Gammaproteobacteria bacterium RIFCSPLOWO2_01_FULL_47_190

near complete RP 45 / 55 MC: 1 BSCG 44 / 51 ASCG 7 / 38
Location: comp(2812..3891)

Top 3 Functional Annotations

Value Algorithm Source
riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] T similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 359.0
  • Bit_score: 709
  • Evalue 2.10e-201
Riboflavin biosynthesis protein RibD n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DCH6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 363.0
  • Bit_score: 401
  • Evalue 6.80e-109
riboflavin biosynthesis protein RibD similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 364.0
  • Bit_score: 388
  • Evalue 1.70e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gammaproteobacteria_47_11 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGTCGCGCGCCCTGCAACTCGCAAGGCGCGGTCTTTATACTGCCCATCCCAATCCGCGTGTCGGCTGCGTTATCGTCAAGGACAACCGGACCATAGCCGAAGGCTGGCATCAACAGACTGGTGGCCCGCATGCCGAGGTGCATGCATTGAATACTGCCGGAGATAAAGCACGTGGAGCGGATTGTTATGTGACACTGGAGCCCTGCGTGCATACCGGCAAAACACCACCATGCACGGATGCCATTATCACTGCCGGAATCAAGCGGGCCGTGGTTGCAGCAATTGATCCAAACCCCAAGGTATCTGGCAAAGGTATAAGTGCATTAAACCAGGCCGGGATCAACACTGAAACCGGTTTGATGCAAACGCAGGCGCAGGCACTTAACCCCGGATTTGAAATGCGTATGCGTAAGGGACGGCCTTATGTCCGGTGCAAGCTGGGCATGAGTGTGGATGGTCGCACCGCCATAGCCGATGGCAAGAGCCAGTGGATCACCGGAGAAGCGGCGAGAGCAGATGTACAACGCTTGCGGGCACGATCGTCAGCTATCCTGACTGGCATCAATACAGTATTGGCTGATGATCCAGGTCTGACCGTACGGGATATTGATACTCTGGGCAGACAACCCCTGCGCGTCATTCTGGACCGGCGTTTGAAGATCCCGGAAGAGGCAAAATTATTCAGCCAGCCCGGGGAGACATTGGTATTTACTGTTTATGGTTGCCCGGACAAGGAACAGGCACTGACAAATGCCGGCCGCCCGGTGGTCCGGATTGATGGTTCGGGTGAAAAGGATTTTCTGCTGGGTGTCCTGCACTATCTCGCAAAAGAAAAAGAAGTGAATGAAATTCTTGTCGAGAGCGGGCCGACATTGGCAGGAGGTTTATTACAGGCCGGTCTGGTGGATGAACTGATTATCTATATGGCGCCGGTATTGCTGGGCCATGAGGCGAAAGCATTATTAAATCTATCCGGCATCAAATCCATGGATGCCAGGATGAAACTGGAAATTACCGATACCAGAATGGTGGGGCAGGATATCAGGATCACATTAAAACCCGTAATTGGTAATTCGTAA
PROTEIN sequence
Length: 360
MSRALQLARRGLYTAHPNPRVGCVIVKDNRTIAEGWHQQTGGPHAEVHALNTAGDKARGADCYVTLEPCVHTGKTPPCTDAIITAGIKRAVVAAIDPNPKVSGKGISALNQAGINTETGLMQTQAQALNPGFEMRMRKGRPYVRCKLGMSVDGRTAIADGKSQWITGEAARADVQRLRARSSAILTGINTVLADDPGLTVRDIDTLGRQPLRVILDRRLKIPEEAKLFSQPGETLVFTVYGCPDKEQALTNAGRPVVRIDGSGEKDFLLGVLHYLAKEKEVNEILVESGPTLAGGLLQAGLVDELIIYMAPVLLGHEAKALLNLSGIKSMDARMKLEITDTRMVGQDIRITLKPVIGNS*