ggKbase home page

RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_5973_1

Organism: Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18

near complete RP 48 / 55 BSCG 49 / 51 ASCG 13 / 38 MC: 2
Location: comp(2..130)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma-E factor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8N6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 43.0
  • Bit_score: 64
  • Evalue 4.00e-08
RNA polymerase factor sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 43.0
  • Bit_score: 91
  • Evalue 4.30e-16
putative RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 43.0
  • Bit_score: 64
  • Evalue 1.10e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gamma2_60_33 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 129
ATGGCGCGGCTGGCGACCGGCAACGCCGACGATGCGCACGATATCGTGCAGGACGCCATGCTGACGCTGGTCAGCCGCTACGCCAGCCGCGGCGAGCAGGAATGGGGACCGTTGTTTCATACCATCCTG
PROTEIN sequence
Length: 43
MARLATGNADDAHDIVQDAMLTLVSRYASRGEQEWGPLFHTIL