ggKbase home page

RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2903_22

Organism: Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18

near complete RP 48 / 55 BSCG 49 / 51 ASCG 13 / 38 MC: 2
Location: comp(19122..20135)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 337.0
  • Bit_score: 656
  • Evalue 1.50e-185
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 331.0
  • Bit_score: 479
  • Evalue 8.90e-133
DNA-directed RNA polymerase subunit alpha n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MAC4_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 331.0
  • Bit_score: 480
  • Evalue 1.40e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gamma2_60_33 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGCAGAGTTCTGCAACCGAATTTCTGAAGCCGCGTCTGGTGGACGTGCAGACGCTATCTTCCACGCACGCGAAAATCACGCTGGAGCCGCTCGAACGCGGTTTCGGCTACACACTCGGCAATGCGCTGCGGCGCATCCTGCTCTCCTCCATGCCGGGGAGTGCGATCACCGAGGTGAAGATTGATGGCGTGCTGCATGAGTACTCCACCATGGAGGGCGTGCAGGAGGATGTGATCGAGATTTTGCTCAATTTCAAGACGGTCGCGCTGCGCATGCACGGCCGTGACGAAGTCACGCTGAAGCTGAGCAAGAAAGGACCCGGCGTTGTCACGGCCGGCGACATCCAGCTGGAACATGACGTGGAAGTGGTGGATCCGAAGCACGTGATCGCCACCCTCACCAAGGACGGAACGCTGAACATGGAGCTCAAGGTGAACCGTGGGCGCGGCTACCAGCCGGTCACGGCGCGCGGCGCCGGAACCGAGGCCCGTACCATCGGCGTCATGCAGCTCGATGCCTCCTACAGCCCGATCCGCCGCGTGGCCTATACGGTCGAAAACGCGCGCGTGGAACAGCGCACCGACCTCGACAAGCTGATTCTCGACATCGAAACCAACGGCGCCATCAACCCGGAAGAGGCGGTGCGGCGCGCGGCCAACATCCTGCAGGACCAGATATCCATTTTCGTCGACCTCAAGAGCCCCGAGACCAAGGCGGAGGAGAAACACAAGCCCGAAATGGATCCGCTGCTGCTGCGTCCCGTGGACGATCTCGAGCTCACGGTGCGTTCGGCCAACTGCCTCAAGGCCGAAAACATTTTCTATATCGGCGATCTCATCCAGCGCTCCGAGTTCGAGCTGCTCAAGACGCCCAATCTCGGCAAGAAGTCGCTCACCGAGATCAAAGACGTTCTGGCCCAGCACGGCCTGTCGCTCGGCATGAAGCTCGAAAACTGGCCGCCGGCTTCCCTGAAGGACATGGAAAAAACCCCGGAGATGGGTTCCGCCACCTGA
PROTEIN sequence
Length: 338
MQSSATEFLKPRLVDVQTLSSTHAKITLEPLERGFGYTLGNALRRILLSSMPGSAITEVKIDGVLHEYSTMEGVQEDVIEILLNFKTVALRMHGRDEVTLKLSKKGPGVVTAGDIQLEHDVEVVDPKHVIATLTKDGTLNMELKVNRGRGYQPVTARGAGTEARTIGVMQLDASYSPIRRVAYTVENARVEQRTDLDKLILDIETNGAINPEEAVRRAANILQDQISIFVDLKSPETKAEEKHKPEMDPLLLRPVDDLELTVRSANCLKAENIFYIGDLIQRSEFELLKTPNLGKKSLTEIKDVLAQHGLSLGMKLENWPPASLKDMEKTPEMGSAT*