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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2903_23

Organism: Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18

near complete RP 48 / 55 BSCG 49 / 51 ASCG 13 / 38 MC: 2
Location: comp(20166..20792)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RS4_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 208.0
  • Bit_score: 311
  • Evalue 5.40e-82
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 415
  • Evalue 4.80e-113
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 208.0
  • Bit_score: 310
  • Evalue 4.40e-82

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Taxonomy

R_Gamma2_60_33 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
GTGGCACGTTACATCGATTCCAAATGTCGTCTCTGCCGGCGCGAAGGCGGCAAGCTGTTCCTGAAAGGCGAGAAATGCTTCACCGAGAAGTGTCCGGTGGAAAAACGCGCCTATGCCCCCGGCCAGCACGGCCAGCAGAAGAGCCGCCTGTCCGATTACGGCAGGCAATTGCGCGAGAAGCAGAAACTGCGCCGCATCTACGGTATTCTCGAGCGTCAGTTCGAGAATTACTACAAAGAAGCCGCGCGCCACAAGGGTTCGACCGGCGAGGATTTGCTGAAGATGCTCGAATCCCGTCTGGATAACGTGGCCTATCGCATGGGGTTCGGCATTTCCCGGGCCGAGGCCAGGCAACTGGTGCGACACAATGCCGTGCGCGTGAACAGCCGGCGCGTCAACATCCCGTCCTACCAGGTCCGGCCGAACGACCTCATCGAGATTTCCACCTCGGCGCAGGAGCAGTTGCGCATCAAGGCCGCGCTCGAGGCGGCCGGCCAGCGCGGGATTCCGGAATGGCTGGATGTCGATGTCAAGGCCATGAAAGGCACGTTCAAGAGCGTGCCGGAACGCAGCGACTTGCCGTCGGACATCAACGAAAGTCTCGTCGTAGCGCTTTATTCGAAGTAA
PROTEIN sequence
Length: 209
VARYIDSKCRLCRREGGKLFLKGEKCFTEKCPVEKRAYAPGQHGQQKSRLSDYGRQLREKQKLRRIYGILERQFENYYKEAARHKGSTGEDLLKMLESRLDNVAYRMGFGISRAEARQLVRHNAVRVNSRRVNIPSYQVRPNDLIEISTSAQEQLRIKAALEAAGQRGIPEWLDVDVKAMKGTFKSVPERSDLPSDINESLVVALYSK*