ggKbase home page

RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_16235_12

Organism: Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18

near complete RP 48 / 55 BSCG 49 / 51 ASCG 13 / 38 MC: 2
Location: 11110..13782

Top 3 Functional Annotations

Value Algorithm Source
secretin n=1 Tax=Methylotenera RepID=UPI0003606FC1 similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 706.0
  • Bit_score: 601
  • Evalue 1.10e-168
Type IV pilus biogenesis protein PilQ; K02666 type IV pilus assembly protein PilQ Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 890.0
  • Bit_score: 1695
  • Evalue 0.0
type IV pilus biogenesis protein PilQ similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 708.0
  • Bit_score: 588
  • Evalue 2.70e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gamma2_60_33 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2673
ATGAATGACAAGACGAGCGAAGCAGGGCTACCTATAGTGAAACAGCAAACTCGAATCTTGCGCAGGGTGGCGCTCGCGTCCGGCCGATGCCTGGCGTTTCTGGTCGCCACGGCCGGGATGACCGCCAGTACCTACGGCGCGGAAATCCAGTCCATCGCCTGGGAGCCGGGCAGCGAAACACCGGTGTTGCAAGTGCGTGCCGCCGGTGAGGCTTCGTTCACCACCCAGGTGCTGGAAGACGGCCAGCGCTTGCGCATCAGCTTCCCGGACAGCAGCATGGGGCCGTCGCTCGCCGAGCTTCAGGGTCTGGACAAGGTGAAGGGCGCATATCCCTATCTTGCCGACAACGGCACGGCCGTCGTGGTGGATCTGCTGATGAATGAGCCCGGCCAGCTCGACGTGCAGAAAGCCGAATACGGATACCGCGTAGCAGCCTCCACGACGGCGCCAGCCGCGGCTGCCGTCGAGCTCCCGCCCGCCGCGCTTGCCCCGACCGTTGCGGTGGAAACGCCGGTTAAGGCCGAGGCGCCCGCCGTGGAAAAACCGGCCGCTGCCGAGCCGCCGCCCGCCGCGCCGGTCGCGGAAGAGAAAAATTCCATTGAGGATATCGTCTACGCCAAGCTGCCCGGCGACCGGATCCAGATTACCTTCAAGATGACCAAGGCGCCCGCGGAACCGAACGCCTTTACCATCACCAATCCGGCGCGGATATCGCTGGATTTCCCGAACACCCGTGTCGGGTTCGCCAAGAAAAGTCTGGCGGTCAAGGAAGCAGCGGTGACCAATGTGACCGCGATCGAAGCGGATGACCGCTCACGCGTGGTGTTGAGCCTGATCAAGCCGGTCGCGTATTCCACGAACATCGAGGGCAACGATTTCATCGTGACCGTGGAGGCGCCCGTCAGCGCCATCGCCGGGGCGGTGGAACCCAAGACCACGCATTTTGCCAGCACCCGCAAAACCGGCAAGTACAGCTTGAAGGGTATCGATTTCCGTCGCGGGCCCCAAGGCGATGGCAAGATCATCATCAGCCTTTCCGATCCCGCCGTGGGTATCGATATCCGCGAGCAGGCCGGCGAGATCATGTTGGACTTTCTGAATACCTCGGCATCCGCCGAGCTGCAACGCCGGCTCGATGTGGTGGATTTTGCTACACCGGTGCAGACCATTGACACCATCGCGCAAGGCAAGAACACGCGCATGATTATCACGCCCAAGGGCAGGTACGAGCACCTGGCGTACCAGACCGGCAATATCTTCACCGTCAGCATCAAACCGGTGATCGAAAAACCGGACGAGAAAAAAGTGGACGAGTTCGGTTATTCCGGGGAAAAGCTGTCGCTCAATTTTCAGAACATCGAGGCGCGCGCCGCGCTGCAGGTCTTGGCGGACTTCACCGGTCTCAATTTCGTCGTCAGCGATACCGTCAAGGGATCCCTGACGTTGCGCCTGAAGGACGTGCCGTGGGATCAGGCGCTCGATCTCATTCTCGATAGCAAAAACCTGGCGATGCGCCGCAAGGGCAACGTGATCACGGTCGCGCCCGCGCCCGAGGTGGCGGCCAAGGAAAAGGCCAATCTGGAGTCGACCAAGGCGGTGATCGATCTCGAGCCGCTGGTGTCGGAACTCGTCCAGATCAATTACGCCAAGGCCGACGATATCGCCAACCTGCTCAAGTCCATCAAGCAGGTAACCACGGCGAGTTCGGAGGAACATCCGGTCTTCGGAAGCACTGCCACGGGTGCGACAATTGAAAAATCCTCGGTAGCTAACACACTCCTGTCACCCCGTGGGCAAGTGACCGTGGATGCGCGCACCAATGCCATTCTTATTCAGGACACGCCCGGCAAGATCCGCGAGGTGCGCAAGTTGATCGCCCAACTGGACCAACCCGTGCGTCAAGTCATGATCGAATCCCGTCTGGTGGAGGCGACCGATAATTTCAGCAAATCGCTCGGCATACGGTTCGGCACGAAGTACGCCGATACCTCACCCAGCGGCCGTGCCGGAGCGGTATCGGGGACGGTGGCCGACAGTTCATCGATTGTGTCGGCCGGAACACTTTCAGCCAGCTCAAGCGGTCTTAATGTCAATCTGCCGTCCGCCGGTATTGGCAGCTCCGTCGCCGGCTCCATCGGCATCACCATTGCCAAGATCGGCTCGAACGGCGGCCTGCTGAACCTGGAGTTGTCGGCGCTGGAGCAGGAAGGCAAGGGCAAGGTCATTTCCAGCCCGCGCGTCATCACCGCCAACCAGAAACTGGCGCGTATCGAGCAAGGTCAGGAGCGGGTATTCACGACCAGCGTGCTGGGTGTCGGCTCCGTGGTGACCAAGAAGGCCACGCTCAAGCTGGAAGTCACGCCGCAGATCACGCCGGATGACCGCATTAACATGGAAGTGAACATCACCAAGGACAACTTTGCCGATGCCGTCGCCGGCGTGCTGAACGTGAAGGAGATCAAAACCCAGGTGCTGCTCGACAACGGCGAGACCGTGGTCATCGGCGGCATCTACGAACAGGACAAGGTTAATACTGTCACCAAGGTCCCGTTTTTTGGAGATATTCCTCTGCTGGGCTGGCTGTTCAAGAGCAAGGAAACCAAGGACAACAAGACCGAGCTGCTGATTTTCCTGACACCCCGGATTCTCTCGGAAAACCTCAGTCTGCGTTAA
PROTEIN sequence
Length: 891
MNDKTSEAGLPIVKQQTRILRRVALASGRCLAFLVATAGMTASTYGAEIQSIAWEPGSETPVLQVRAAGEASFTTQVLEDGQRLRISFPDSSMGPSLAELQGLDKVKGAYPYLADNGTAVVVDLLMNEPGQLDVQKAEYGYRVAASTTAPAAAAVELPPAALAPTVAVETPVKAEAPAVEKPAAAEPPPAAPVAEEKNSIEDIVYAKLPGDRIQITFKMTKAPAEPNAFTITNPARISLDFPNTRVGFAKKSLAVKEAAVTNVTAIEADDRSRVVLSLIKPVAYSTNIEGNDFIVTVEAPVSAIAGAVEPKTTHFASTRKTGKYSLKGIDFRRGPQGDGKIIISLSDPAVGIDIREQAGEIMLDFLNTSASAELQRRLDVVDFATPVQTIDTIAQGKNTRMIITPKGRYEHLAYQTGNIFTVSIKPVIEKPDEKKVDEFGYSGEKLSLNFQNIEARAALQVLADFTGLNFVVSDTVKGSLTLRLKDVPWDQALDLILDSKNLAMRRKGNVITVAPAPEVAAKEKANLESTKAVIDLEPLVSELVQINYAKADDIANLLKSIKQVTTASSEEHPVFGSTATGATIEKSSVANTLLSPRGQVTVDARTNAILIQDTPGKIREVRKLIAQLDQPVRQVMIESRLVEATDNFSKSLGIRFGTKYADTSPSGRAGAVSGTVADSSSIVSAGTLSASSSGLNVNLPSAGIGSSVAGSIGITIAKIGSNGGLLNLELSALEQEGKGKVISSPRVITANQKLARIEQGQERVFTTSVLGVGSVVTKKATLKLEVTPQITPDDRINMEVNITKDNFADAVAGVLNVKEIKTQVLLDNGETVVIGGIYEQDKVNTVTKVPFFGDIPLLGWLFKSKETKDNKTELLIFLTPRILSENLSLR*