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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2829_34

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(27193..28227)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKT29352.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 344.0
  • Bit_score: 696
  • Evalue 1.80e-197
coiled-coil id=5227114 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 342.0
  • Bit_score: 271
  • Evalue 1.30e-69
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 342.0
  • Bit_score: 200
  • Evalue 1.10e-48

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Taxonomy

Parcubacteria bacterium GW2011_GWC1_44_10 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGAAATACGCATTACCGGTTCATCCGGAGGAGGTCACAAAAAAGCTGTTTATGGTTTTGCCAAAGCGGACCAAAGATATATTGGAGCAGCGTTTTGGTTTGAGTAAAAATCCAAGGCGAATGACTTTGGAGGCAATTGGCCAAAAATACAGCATTACCCGCGAGCGGGTGCGGCAGGTTGAAGCAGATGGCTTTAATCGCATTAGAAAATCTCCGCAAATGCAGGAGCTGACGGTGGTTTTTACGGCCTTGGAGGAGTATTTTGAACACGAGGGGCGTGTTTTAAAAGAGGAGCATGTTTTGAAAAATCTTGCACCGCATCCAAAACACGAAAACCATGTGTATTTTTTGCTTTCTTTGCACAACCCATTCTTAAGATTTCATGAAAACGACGAGCTTTGCGATCGTTGGGCATATGGCGAAGGGGCCGAAGAACGCGCTCAGAAATCCCTTTCTCACGCGGTTGAGGAATTGCGCAAAACAGGCCACCCGGTGGAAGAAAGCGGGCTGTTTGAAACGCTTTCTTCGTCCGCGCGGCATATTACTGGCGGGGAAGTAAGCAATATCGTTTTGGCGAATTGGCTCGGCCTTTCCAAGCTGATTGCCAAAAATTATTTCGGCCAGTGGGGTCTTACGGAATTTCCGGAAATAAAGCCCAGAGGCGTGCGGGATCTTTCGCACATGGTGCTTGTGCGGCACGGCAAGCCACTGCATTTTTCCGAGGTCGCTTCTAAAATCGGCAAATTGGTTGGCAAGCCGGTACACACGCAAACCGTGCACAATGAACTTATTAAAGACGACCGCTTTGTTTTGGTGGGTAGGGGTCTTTACGCGCTTAAAAACTGGGGATATGCTCCTGGGGTGGTTAAAGATGTGATTACGGAGGTGCTCAAAAAAGACGGCCCAATGGCTAAAGATAAAATAATTTCGGCTGTTTTGCGCCAGCGAATCGTGAAGCCAAACACTGTGTTTATTAATCTGGAAAACAAAAAATATTTCAAAAAGTTAGCTGATGGCAGATATAATCTTAAATGA
PROTEIN sequence
Length: 345
MKYALPVHPEEVTKKLFMVLPKRTKDILEQRFGLSKNPRRMTLEAIGQKYSITRERVRQVEADGFNRIRKSPQMQELTVVFTALEEYFEHEGRVLKEEHVLKNLAPHPKHENHVYFLLSLHNPFLRFHENDELCDRWAYGEGAEERAQKSLSHAVEELRKTGHPVEESGLFETLSSSARHITGGEVSNIVLANWLGLSKLIAKNYFGQWGLTEFPEIKPRGVRDLSHMVLVRHGKPLHFSEVASKIGKLVGKPVHTQTVHNELIKDDRFVLVGRGLYALKNWGYAPGVVKDVITEVLKKDGPMAKDKIISAVLRQRIVKPNTVFINLENKKYFKKLADGRYNLK*