ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_3318_6

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(5940..6836)

Top 3 Functional Annotations

Value Algorithm Source
polA; DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] id=5803218 bin=OD1_GWC2_34_28 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 299.0
  • Bit_score: 349
  • Evalue 2.50e-93
DNA polymerase I (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 293.0
  • Bit_score: 238
  • Evalue 2.30e-60
Polymerase protein {ECO:0000313|EMBL:KKT56870.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 298.0
  • Bit_score: 584
  • Evalue 1.10e-163

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGAAAACACTTGTTTTATTGGACGCTCATGCTTTAATTCATCGTGCGTATCACGCGCTTCCGAAGTTTACTTCCAAAAATACCGGCGAGCCGACCGGAGCGCTTTACGGCCTTTCAACTATGCTTTTGAAAGTTATTCGGGAATTAAAACCGGATTATATTGTTGCCGCGTTTGACCGGCCCGAGCCGACCTTCCGGCACGAAAGCTACGAAGCCTACAAAGCCAAACGTCCGGAAGCGGAAGACGATTTGGTAAAACAATTGATTCGGTCGCGCGATGTTGTTGAAGCGTTCGGAATTCCTATTTTAGACGCGGCCGGATTTGAGGCCGATGACATTTTGGGGACGATCGTGGAACAAACTAAAAAATTAAAAGACACAAAAACAATTATTGTCTCGGGCGATATGGATGTTTTGCAGTTGGTAGATGACAACAAGGTTGTTGTTTACACTTTGCGCAAAGGCATTGAGGACACGGTTATATATGACGAGGCAAAAGTGGTTGAGAGGTACGGATTCCCCCCGTCCGCCATACCGGACTTTAAAGGGTTAAAGGGTGACCCATCGGATAATATCATCGGAGTAAAAGGCATAGGCGAAAAAACTGCGACTGATATAATTAAAAATTTTGCAACGCTGGAAAATTTATATAACAAATTAGAAGTCGGAGGTGGGAGATTAGAAGTCGGAAAGATTGTGAAAGAGCGCGTTATAAATTTGCTTTCGGATCACAAAGAAGACGCATTTTTTTCAAAAACACTTGCTACTATCCGGCGAGATGCGCCAATTAATTTCCAACTCCCGATTTCTGGCTTCCAACTTCGCAAGGACCAATTAAAAGCCCTTTTTGAAGAACTTGGCTTTACCAGCCTTGTGGCGAGACTGAATTCCGAGTGA
PROTEIN sequence
Length: 299
MKTLVLLDAHALIHRAYHALPKFTSKNTGEPTGALYGLSTMLLKVIRELKPDYIVAAFDRPEPTFRHESYEAYKAKRPEAEDDLVKQLIRSRDVVEAFGIPILDAAGFEADDILGTIVEQTKKLKDTKTIIVSGDMDVLQLVDDNKVVVYTLRKGIEDTVIYDEAKVVERYGFPPSAIPDFKGLKGDPSDNIIGVKGIGEKTATDIIKNFATLENLYNKLEVGGGRLEVGKIVKERVINLLSDHKEDAFFSKTLATIRRDAPINFQLPISGFQLRKDQLKALFEELGFTSLVARLNSE*