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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_19

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(14802..15920)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus biogenesis protein PilM {ECO:0000313|EMBL:KKT30094.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 372.0
  • Bit_score: 711
  • Evalue 4.50e-202
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=5803086 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 373.0
  • Bit_score: 247
  • Evalue 1.70e-62
pilM; type IV pilus biogenesis protein PilM similarity KEGG
DB: KEGG
  • Identity: 29.1
  • Coverage: 364.0
  • Bit_score: 146
  • Evalue 1.20e-32

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Taxonomy

Parcubacteria bacterium GW2011_GWC1_44_10 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGGCGCTTTCAACGATATTGGAGGGGTTTGGCCTTAAAAGGGCCTCCGGGTTTTTTATCCAAGAGGCCAGGTTTTTGGGCGTTGACATAGGCTCTTCTTCAATTAAGGTTGTGCAGCTTAAAAAAGAAAAAGAACGCGCTTTGTTGGAAACATACGGCGAGCTTTCTCTGGCCAGATACGGAGACGGATCCGTCGGGAGATCGTTGAGGCTTTTGGAGGTAAAACTGGTTGAAGCTTTGCAGGACATAATACGCGAGGCGCAGGTTAAAGCCACAAAAGCTATCGTATCTATCCCGCTTAAAGACAGTTTTCTGACAACTATGGATTTGCCGGAACTTGGAGAGGAGGATATGAAAGAAGCCGTGCCCTACGAAGCGAGAAAATACGTTCCTGTCCCGATAAGCGAAGTGGTTTTGGACTGGCATGTTCTTCCTCCGAAAAGCGAAGAGCAAAAGTCTGCTTCTATCGGCTCGGCTAGGAAAAAATTTCGCACCGTGTTTTTAGCGGCCGTGCCGAAAGAATTAATTTCTAAGTACAAAAAAAATTTTGAGAGCGCCGGGCTGGAAATTTCCGCGTTTGAAATAGAAGTATTTTCTTTTGCGCGCGCGGCTTTGCGGCGCGATTCGGAAACAAGCCTGATTATGGATTTGGGCGCCTCTTCTGTTAAATTGACAATTGCTGACGGCGGCGCGGTCAGGGCTTCGCACAGTTTAGACAGGGGTTCGCAGGATCTGACCTTGGCGCTTTCGCAATCGCTCGGCGTTGACTGGGACCGTGCGGAAATTTTGAAACGTGAAAACGGCATAATAAAAAAGCCGGAAACGGAAGGCGTGGCTTTGGTGCTTGAGCCGCTGGTTGAGTTTTGGGCGTCGGAAGGAGAGCGGTTTTTGCTGGATTGGAAACGCAAAGGCGGAAGATCCATTTCCAAAGTTTTGATTGGCGGAGGCGGAGCATTGCTCCCCGGCATCAAAGATTTGCTTGTAAAAAGATTCGGGGTTGAGGTGTTCGTGATAAACCCATTTTCTAAAGTAGTGTATCCTGCTTTTTTGGAACCGGCGTTGCGCGAAGTTGGCGCAACATTCACAAACGCTGTCGGCCTCGCACTCCATGAGTTTTAA
PROTEIN sequence
Length: 373
MALSTILEGFGLKRASGFFIQEARFLGVDIGSSSIKVVQLKKEKERALLETYGELSLARYGDGSVGRSLRLLEVKLVEALQDIIREAQVKATKAIVSIPLKDSFLTTMDLPELGEEDMKEAVPYEARKYVPVPISEVVLDWHVLPPKSEEQKSASIGSARKKFRTVFLAAVPKELISKYKKNFESAGLEISAFEIEVFSFARAALRRDSETSLIMDLGASSVKLTIADGGAVRASHSLDRGSQDLTLALSQSLGVDWDRAEILKRENGIIKKPETEGVALVLEPLVEFWASEGERFLLDWKRKGGRSISKVLIGGGGALLPGIKDLLVKRFGVEVFVINPFSKVVYPAFLEPALREVGATFTNAVGLALHEF*