ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_5119_2

Organism: Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_48_100

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38
Location: comp(3465..6701)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2106
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 999.99
  • Bit_score: 1097
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZL8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 999.99
  • Bit_score: 1450
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_11_47_18 → RIF-OD1-11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3237
ATGGGAATTGCCATTGATGTTGCGGATGTTGCGAAGCGTCCGAAGAAATATTTCGGAGCGTTCCGCGAGCCGCTCGCGGAGTTTCCGAACTTTGTTGAGCCCCAGCTGAATTCGTTCCGTTTGTTTATTGAAAAGGGCGTGAAGGCCGTCTTTAAGGAATTCTCTCCGATAAAAGATTATTCGGGCAAGAAGTTTGAATTGGATTTCTCACACATTTCCATTGGCGAACCGAAATGCGATGAGCACACGGCAAAAGCCAATAAGGTTTCTTACGAAGCGCCAATCAAAGTGGTTGTGCGCCTAAAAAACAAATTGGAGGGTACCGAGAAGGAGCAGGAAATCTTCATGTCGGATGTTCCGCTTATGACCAACCACGGCACATTTGTTATTTCCGGAGTTGAACGCGTCATTGTACCGCAACTCGCGCGTTCTTTCGGCGTCTTTTTCACCGCCGAGGAAGTGCGCGGCAAGAAATATTTCGGCGCGAAGATTATGCCCGCGCGCGGCGCGTGGATTGAGATAGACACCGACCCCGACGGCGCGATTTATGTGCGCATAGACCGCAAACGCAAGTTCCCGCTCTCATCGCTCCTTCGCATATTGGGTGCTGGAACAGATGACGCAATCAAAGCGCTCTTTGCTGGAACTCCTGCGGAACAATTTATTACAGTTACGCTCGCGAAAGACCACGCAAAGGAAGCTCCTCAAGCGTATCTTGAAGTATACAAGCGCCTCCGCGACGGAGAAATCGCCACTCCAGAAACCGCACGCACTTTTGTTACCTCTATTTTTGATGTAGACCGCTATAACCTTTCCAAGGTTGGGCGGTTTCGTTTTAATCGCAGATTCGGAAAGACGCTTGAATGCAAAGAAGCCGAGCGAATGACTTTGTCGCTTGACGATGTAGTAACTTCGGTCGTGCATGTGTGCAAACTTGCAACAACAGACGGCGCGGTTGAAGACGATATAGACCACCTTGGGAGCCGCCGCGTGCGTTTTGTCGGGGAACTTTTGGAACAAAAAGTACGCGTTGGTATGACGCAGATGAAGCGCAATTTGCAAGACAGAATGTCCACAGTGGAATCGGACCTCACGCTTCCGTCGCAATTCATTTCGCCGAAGCCGCTTCAGGCGCGCATTCGCGAATTCTTCACCACCAACCAACTATCGCAGTTTATGCAGCAAGAAAATATTCTTGCGGAAATAGAGCATTTGCGTACGGTGTCTGCGCTCGGTCCAGGCGGACTAACACGCGAACGCGCGGGTTTTGAGGTGCGCGATGTGCACCCTTCGCACTATGGGCGTCTTTGCCCCATACAGACCCCGGAAGGCGGAAGCATTGGCCTAATTTTGCGTCTCGCCAACTACGCGCGGCTCAACGAATTCGGAATGATTGAGACACCTTACGCGCGTGTGAAAGACGGAATTATTACGAAAGAAATTGAATATCTGAATGCATTGGAAGAAGAAGGAAAGAAAATTGCGCACGCCGCAGTTCTTCGCGACGAAAACGGCGCGCTTTTGGAAAAGGAAGTAGAGGTGCGCGTGGCGGGCGCGCCGTCAATCGTGTCTGCGAAAGAAGTTGAATATATAGATATAGCGACAAATCAAGCGTTTTCTATTACAACTTCAATGATTCCGTTCTTGAACCACGACGACGCGAACCGCGCGCTTATGGGTTCCAACATGCAAAAGCAAGCAACGCCGTGCCTAGTGCCGGAAGCGCCGCTTGTAGCGACCGGTATTGAAGGCAAAGCGGCGCGTGACACCGGGCGACTCATTATTGCAGAAGAAGAAGGTGTTGTTTCTTTTGTAGATGCGCGGCGCATTGGCGTTAAAAATATAAAAGGAAAAGAACACTCATACCCCCTCGTTTCATTCCAGCGCACCAACGGCTTTACGGCTTTTCATCAGCGGCCTGCGGTGTCGGTAGGAGACAAAGTAAAGAAAGGAACACTTCTTGCCGACACTTCGTCCAGCGAAGGAGGGGAAATGGCGCTAGGACACAATGTTCTAGTCGCCTTTATGTCGTGGGCGGGTGCAAACTACGAAGACGCGATTATTGTATCCGAACGAATGGTCCGTGAAAGCAAGTTCTCGTCCATACATATTGAAGAGTTTGTGGTGAATGTGCGCGATACGAAGCTTGGACCCGAAATTACAACTCACGACATTCCAAATGTCGGCGAAGCTAAATTAAAAAATCTGGACGAAGACGGAATTATACGCATTGGCGCGGAAGTCCGCCCTGGCGACATTTTGGTCGGCAAAATTACTCCGAAAGGCGAAACACAGCTCACCCCAGAAGAACGACTTCTTCGTTCGCTATTCGGCGAGAAGGCGCGTGATGTGAAAGATACTTCCAAGCGAACGGAGGGCGGCAAGCGCGGACGCATCATTAGCGTGAAGGTATTTTCGCGCGAGCGCGGCGACAAGTTGGAGAGTGGTATTCTGAAGCGTATACATATTGAAGTAGCGCAACTACGAAAAGTGTCGGTAGGAGACAAACTTGCGGGCCGCCACGGCAACAAAGGCGTTATTTCTAAAATCTTGCCTGTGGAAGAAATGCCATTTACTGCAGATGGCACGCCGATAGATATTATTCTGACTCCACTAGGAGTACCTTCCCGTATGAATCTCGGGCAGATTTTAGAATTGCATTTGGGGCTTGCGGCGGGCGCACTCGGCTATCAGGCGGTCGTGCCGCCGTTTGCGGGCGCGACTGATGGAGAAATAAAAGACGAATTGGTTCGCGCGGGGTTTTCTAAAAACGGAAAAATGAAATTGTACGATGGCAGGACAGGCGAGCCGTTCGCGCAAGATATCGCAGTCGGCACTATGTACATTATGAAATTGCACCATATGGTGGAAGACAAAATTCATATGCGTTCTATCGGTCCGTACTCAATGATTACCCAACAGCCACTCGGCGGCAAAGCGCAGGGAGGCGGACAGCGGTTCGGCGAAATGGAAGTGTGGGCGCTCCTCGGACACGGCGCGGCGTACACGCTACGCGAAATGTTGACGATAAAATCAGACGATATCCCGGGGCGCGCGGCGGCATTTGATTCAATTGTGAAAAATGAACCGATTTCGTACAGCGGCGTACCCGCATCATTCAGCGTGCTTCTGAACAATTTGCGCGGGCTTGCACTGGACACAGAGTTACAAGGAGGCAATAAAGGCGACGGCGATGCGCCTACTCGTTCCCGCTCTCGCTCACGCACCCGTTCCTAG
PROTEIN sequence
Length: 1079
MGIAIDVADVAKRPKKYFGAFREPLAEFPNFVEPQLNSFRLFIEKGVKAVFKEFSPIKDYSGKKFELDFSHISIGEPKCDEHTAKANKVSYEAPIKVVVRLKNKLEGTEKEQEIFMSDVPLMTNHGTFVISGVERVIVPQLARSFGVFFTAEEVRGKKYFGAKIMPARGAWIEIDTDPDGAIYVRIDRKRKFPLSSLLRILGAGTDDAIKALFAGTPAEQFITVTLAKDHAKEAPQAYLEVYKRLRDGEIATPETARTFVTSIFDVDRYNLSKVGRFRFNRRFGKTLECKEAERMTLSLDDVVTSVVHVCKLATTDGAVEDDIDHLGSRRVRFVGELLEQKVRVGMTQMKRNLQDRMSTVESDLTLPSQFISPKPLQARIREFFTTNQLSQFMQQENILAEIEHLRTVSALGPGGLTRERAGFEVRDVHPSHYGRLCPIQTPEGGSIGLILRLANYARLNEFGMIETPYARVKDGIITKEIEYLNALEEEGKKIAHAAVLRDENGALLEKEVEVRVAGAPSIVSAKEVEYIDIATNQAFSITTSMIPFLNHDDANRALMGSNMQKQATPCLVPEAPLVATGIEGKAARDTGRLIIAEEEGVVSFVDARRIGVKNIKGKEHSYPLVSFQRTNGFTAFHQRPAVSVGDKVKKGTLLADTSSSEGGEMALGHNVLVAFMSWAGANYEDAIIVSERMVRESKFSSIHIEEFVVNVRDTKLGPEITTHDIPNVGEAKLKNLDEDGIIRIGAEVRPGDILVGKITPKGETQLTPEERLLRSLFGEKARDVKDTSKRTEGGKRGRIISVKVFSRERGDKLESGILKRIHIEVAQLRKVSVGDKLAGRHGNKGVISKILPVEEMPFTADGTPIDIILTPLGVPSRMNLGQILELHLGLAAGALGYQAVVPPFAGATDGEIKDELVRAGFSKNGKMKLYDGRTGEPFAQDIAVGTMYIMKLHHMVEDKIHMRSIGPYSMITQQPLGGKAQGGGQRFGEMEVWALLGHGAAYTLREMLTIKSDDIPGRAAAFDSIVKNEPISYSGVPASFSVLLNNLRGLALDTELQGGNKGDGDAPTRSRSRSRTRS*