ggKbase home page

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_3330_4

Organism: Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38 MC: 2
Location: comp(1279..1950)

Top 3 Functional Annotations

Value Algorithm Source
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III; K10773 endonuclease III [EC:4.2.99.18] Tax=GWD2_Deltaproteobacteria_55_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 217.0
  • Bit_score: 430
  • Evalue 1.60e-117
endonuclease III (EC:4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 219.0
  • Bit_score: 225
  • Evalue 2.00e-56
Endonuclease III id=1801593 bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 224.0
  • Bit_score: 442
  • Evalue 2.20e-121

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWD2_Deltaproteobacteria_55_8_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGGTTCGGGCCAAACCAAAAAAAAGCAAATTCCCCGCCGACAAAGCCAGGGTAAAAAAAATCACCTCCAAGCTCAATCGCGCCCACCCTGACGCCAAGCTCGATCTCGACTTTTCCAACCCCCTGGAACTCCTGATTGCCCTCATCCTGGCCGCTCAGGCCAGAGACGATCTCGTCAATCAAGTTACGCCCGCACTCTTTGCCAAGTATCGGCATGCCAAAGACTATGCCTCCGCTCCTCCGGAGCAACTCAGCGCGGATATCCGCAGGATTAACTTCTATCGTGTCAAGAGCGGGCGGATCAAGAACTGCTGCGCGGAACTCGTCCGCAGCTTTAAGGGCGAGGTGCCGCGAAAGCTGGACGATCTCTTGACCCTTCCCGGCGTCGGAAGAAAAACCGCCAACATCCTTCTTGGCAACGCCTTCGGCAGACAGGCCATCGGCGTCGATACCCACGTCATGCGGCTCTCGCAGAGATTAGGACTTACGCGCAACACCAACCCGGACAAGATTGAGTTTGATCTAACGGCCATCGTCCCGGAGAAGCAGAGGGTCCGCTTCTGCCACCTGCTCCAATACCACGGCCGCCGTGTCTGCTTCGCCAAGAAGCCGCGCTGCCCGGAGTGCACAATCAACGACCTGTGCCGGTATCCGGACAAGACGAAAGCTTAG
PROTEIN sequence
Length: 224
MVRAKPKKSKFPADKARVKKITSKLNRAHPDAKLDLDFSNPLELLIALILAAQARDDLVNQVTPALFAKYRHAKDYASAPPEQLSADIRRINFYRVKSGRIKNCCAELVRSFKGEVPRKLDDLLTLPGVGRKTANILLGNAFGRQAIGVDTHVMRLSQRLGLTRNTNPDKIEFDLTAIVPEKQRVRFCHLLQYHGRRVCFAKKPRCPECTINDLCRYPDKTKA*