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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_8262_2

Organism: Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38 MC: 2
Location: 1300..1884

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE1; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 194.0
  • Bit_score: 394
  • Evalue 6.30e-107
RNA polymerase sigma factor id=3733115 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 199.0
  • Bit_score: 139
  • Evalue 3.40e-30
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 192.0
  • Bit_score: 127
  • Evalue 3.80e-27

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Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
GTGGTGCGCGAGGGAAGAGCTCAGCCGGAAGGGAGAGAGGCATTTCTCCAGGAGCTCATGACGTACATGGACCATCTCTACAGGATGGCCTTTCACCTGGCAAAGGAAAGGGACGAGGCCCAAGATATCGTTCAAGAGACCTGCGTTCGGGCGCTCGCCGCCTACGAGCAGTTCACTCCCGGAACCAACATGAAGGCGTGGTTGACCAAGATCCTGTACAATTTTTTTTTCGACCATTTCCACCAGAAGAAGAGGTGGATTTCGGTGGAAGACCGAACCGGCGAAGGGGACGAGGGGTCAGATTACTGGGACAGAGTGCCCGCGCAAAATCCCGGGCCGGAAAGCCATATTTTACTCAAGGAGCGAAGCGCCAAAATTACCGACGCCTTAAGAAAGATCCCCGGGGAATTCCGCGCGCCTATTCTCCTGGTGGACATGGGAGACTTTTCTTACGCGGAGGCGGCCGAGATACTTTCCTGTCCTGTCGGCACGGTCCGTTCCCGGCTCTCGCGCGGGAGAAGGCTCCTGGCCAACCATCTCAAGGGATACATCGGCGCCCCTGAGAAGGGAGCCGCAGAAAAATGA
PROTEIN sequence
Length: 195
VVREGRAQPEGREAFLQELMTYMDHLYRMAFHLAKERDEAQDIVQETCVRALAAYEQFTPGTNMKAWLTKILYNFFFDHFHQKKRWISVEDRTGEGDEGSDYWDRVPAQNPGPESHILLKERSAKITDALRKIPGEFRAPILLVDMGDFSYAEAAEILSCPVGTVRSRLSRGRRLLANHLKGYIGAPEKGAAEK*