ggKbase home page

RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_79_rifcsplowo2_02_scaffold_34211_4

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_79

partial RP 42 / 55 BSCG 40 / 51 ASCG 5 / 38
Location: comp(3188..3424)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003819B6C similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 78.0
  • Bit_score: 144
  • Evalue 4.30e-32
RNA chaperone Hfq; K03666 host factor-I protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 78.0
  • Bit_score: 155
  • Evalue 4.40e-35
RNA chaperone Hfq similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 78.0
  • Bit_score: 143
  • Evalue 2.00e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGAGTAACAAAGGGCAGTTGCTACAAGACCCGTTCCTGAACACTTTGCGCAAAGAGCACATCCCGGTGTCGATCTACCTGGTGAACGGCATCAAGCTGCAGGGCCAGATTGATTCGTTCGACCAGTATGTCGTGCTGCTCAAGAACACGGTCACGCAGATGGTTTACAAGCATGCGATTTCGACCGTCGTTCCCGCGCGGGCCGTCAACGTCCAGCTCGATCAAAGCGCAGAATAG
PROTEIN sequence
Length: 79
MSNKGQLLQDPFLNTLRKEHIPVSIYLVNGIKLQGQIDSFDQYVVLLKNTVTQMVYKHAISTVVPARAVNVQLDQSAE*