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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_42364_1

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_68_150

near complete RP 50 / 55 BSCG 50 / 51 ASCG 12 / 38
Location: comp(3..203)

Top 3 Functional Annotations

Value Algorithm Source
putative RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 139
  • Evalue 1.60e-30
RNA polymerase sigma factor id=4792154 bin=GWA2_Bacteroidetes_42_15 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 63.0
  • Bit_score: 73
  • Evalue 1.00e-10
putative RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 62.0
  • Bit_score: 65
  • Evalue 8.00e-09

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Taxonomy

R_Betaproteobacteria_68_150 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGCGCTACCAACGACCGATTTACAACGTTGCCTACCGAATTCTCGGTAATGCCGAGGACGCGAGCGAAATTACGCAAGGTGTGTTCCTGAAAGTCGCGGAACGACTGGATGAATACGACCCGAGGTTCAAGTTCTTCAGTTGGATCTGTCGCATTTCGATCAATGAGTCACTTAATTTGCTGCGCCGCAACGGACGCGAA
PROTEIN sequence
Length: 67
MRYQRPIYNVAYRILGNAEDASEITQGVFLKVAERLDEYDPRFKFFSWICRISINESLNLLRRNGRE