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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_25566_5

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_68_150

near complete RP 50 / 55 BSCG 50 / 51 ASCG 12 / 38
Location: 2693..3286

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMH9_AZOSU similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 199.0
  • Bit_score: 289
  • Evalue 3.50e-75
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 387
  • Evalue 1.00e-104
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 199.0
  • Bit_score: 287
  • Evalue 2.90e-75

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Taxonomy

R_Betaproteobacteria_68_150 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
GTGACTTCGCACGACGTCGACCGGGAGCTGGTTGCCCGGGTCCAGCGTGGCGACAAGCAGGCATTCGGGCTGCTGGTGGAGAAATACCAGCGCAAGCTCGCGCGGCTGTTGCAGCGCCTGATTCGCGACCCGGCCGAGGTCGAGGACGTGACGCAGGAAGCGTTCATACGCGCCTATCGGGCGCTGCCCGCGTTTCGCGGCGAGAGCGCGTTCTACACCTGGCTGTATCGCATCGGCGTCAACACCGCCAAGAACCACCTCATGGCGATGGGGCGCCGGGCGCCGGGCGCGGTAGAGGCCACCGAGGCCGAGGGCCTCGACGAAGGTGAGCAGTTGCGGGACATCAATACGCCGGAAAACGTCTTGATGTCGAAGGAAATCGCCGCGACGGTCAACGCGGCGATCGCTGAACTGCCGGAAGAGTTGCGCAACGCCATCCAGTTGCGCGAGCTCGACGGCCTGAGCTACGAGGAAATTGCACAGATCATGAATTGTCCGATTGGCACCGTGCGCTCGAGGATTTTCCGCGCCCGCGACGCCATCTCGCACAGATTGCGGCCGCTGCTCGAACCACGCAAGGACCGGAGGTGGTGA
PROTEIN sequence
Length: 198
VTSHDVDRELVARVQRGDKQAFGLLVEKYQRKLARLLQRLIRDPAEVEDVTQEAFIRAYRALPAFRGESAFYTWLYRIGVNTAKNHLMAMGRRAPGAVEATEAEGLDEGEQLRDINTPENVLMSKEIAATVNAAIAELPEELRNAIQLRELDGLSYEEIAQIMNCPIGTVRSRIFRARDAISHRLRPLLEPRKDRRW*