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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_1275_1

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_68_150

near complete RP 50 / 55 BSCG 50 / 51 ASCG 12 / 38
Location: comp(2..745)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein, putative TDP-4-oxo-6-deoxy-D-glucose transaminase n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SYW4_META2 similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 248.0
  • Bit_score: 396
  • Evalue 2.60e-107
rffA; lipopolysaccharide biosynthesis protein, TDP-4-oxo-6-deoxy-D-glucose transaminase; K02805 lipopolysaccharide biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 248.0
  • Bit_score: 487
  • Evalue 1.20e-134
rffA; lipopolysaccharide biosynthesis protein, TDP-4-oxo-6-deoxy-D-glucose transaminase similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 248.0
  • Bit_score: 396
  • Evalue 7.30e-108

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Taxonomy

R_Betaproteobacteria_68_150 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGAAGGTCCCCTTCAACCGGCCGCACATGACCGGCCGGGAGCTCAGCTACATCGCGCGCGCCCACCAGAATTCCATGCTGGCCGGCGACGGCCCGTTTACCGCCGCCTGCAGCCGCTGGCTCGAGCAGCGAACCGGCGCGCGCAAAGCGCTGCTGACGCACTCGTGCACCGCGGCGCTCGACATGGCCGCGATCCTCGCCGGCATCGGGCCGGGCGACGAAGTGATCCTGCCCTCCTACACTTTCGTCTCCACGGCCAATGCCTTCGTGCTGCGCGGCGGCGTCCCGGTGTTCGTCGACATCCGCGCCGACACGCTCAATCTCGACGCATCGCTCATCGAGTCCGCGATCACGCCGCGCACGCGCGCCATCGTGCCGGTGCACTACGCCGGCGTCGCCTGCGAGATGGACGCGATCCTCGAGATCGCCCGGCGCCGCGGCCTGCTGGTGATCGAGGACGCGGCGCAGGGCCTGATGTCGGACTACCGCGGGCGCGCCCTGGGCGCGCTTGGCGCGCTCGGCGCGCTGAGCTTCCATGAGACCAAGAACGTGATCTCGGGCGAAGGCGGCGCGCTGCTGGTGAACGACGAGCGCCTGATCGCACGCGCCGAGATCGTGCGCGAGAAAGGTACCGACCGCAGCCGCTTCTTTCGCGGCGAGGTGGACAAGTACACCTGGGTCGACATCGGCTCGTCGTTCCTGCCGGGCGAGATCGTCGCCGCGTTCCTGCTCGCGCAGATGGAG
PROTEIN sequence
Length: 248
MKVPFNRPHMTGRELSYIARAHQNSMLAGDGPFTAACSRWLEQRTGARKALLTHSCTAALDMAAILAGIGPGDEVILPSYTFVSTANAFVLRGGVPVFVDIRADTLNLDASLIESAITPRTRAIVPVHYAGVACEMDAILEIARRRGLLVIEDAAQGLMSDYRGRALGALGALGALSFHETKNVISGEGGALLVNDERLIARAEIVREKGTDRSRFFRGEVDKYTWVDIGSSFLPGEIVAAFLLAQME