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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6378_18

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_68_150

near complete RP 50 / 55 BSCG 50 / 51 ASCG 12 / 38
Location: comp(16010..16564)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IWW7_PSEUL similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 175.0
  • Bit_score: 201
  • Evalue 5.30e-49
rpoE; ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 377
  • Evalue 9.90e-102
rpoE; ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 175.0
  • Bit_score: 201
  • Evalue 1.50e-49

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Taxonomy

R_Betaproteobacteria_68_150 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGTCCGCCGAGTACCGCTCCCAAGTCGAAAGCCAGCGGGCCTACCTGCTGCGCTACGCGACGCTGCAGCTGCGCGACCGGGATGCAGCCGAGGACGCCGTTCAGGAAACCCTGCTCGCGGCGCTCGCCGACGGGGCCGGGTTTTCCGGCCGCTCGAACCTGCGCACTTGGCTGACCGGAATCCTGAAGCACAAGATTGTCGATGCCATCCGCAGAGCAAGCCGTGAGCAACCGCTCGCGCCAGCCGACGAGCTGGAGACGGGTGACCTCGACGCCCCATTCGATCGGCGCGGGCATTGGCAGGAGCCGCCCACGGCCTGGGACGATCCCGACGGCGCGCTTCATCAAAAGCAGTTCCTTGCCGCGCTCGAGGCCTGTCTGGCGGGCTTGCCCGCGAAGACCGCGCAAGCGTTCATGATGCGCGAGCACCTGGGGCTCGAAACGGGCGAGATCTGTAAGGAACTCGGCATTACGGCGACGCATTGCTGGGTGCTCCTGTACCGCGCCCGGATGGCGTTGCGCCAATGCCTGGATACGAACTGGTTTCGAACATGA
PROTEIN sequence
Length: 185
MSAEYRSQVESQRAYLLRYATLQLRDRDAAEDAVQETLLAALADGAGFSGRSNLRTWLTGILKHKIVDAIRRASREQPLAPADELETGDLDAPFDRRGHWQEPPTAWDDPDGALHQKQFLAALEACLAGLPAKTAQAFMMREHLGLETGEICKELGITATHCWVLLYRARMALRQCLDTNWFRT*