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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6315_17

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_68_150

near complete RP 50 / 55 BSCG 50 / 51 ASCG 12 / 38
Location: comp(16973..17176)

Top 3 Functional Annotations

Value Algorithm Source
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 140
  • Evalue 7.40e-31
cold shock protein similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 66.0
  • Bit_score: 132
  • Evalue 5.30e-29
Cold-shock DNA-binding domain protein id=2101348 bin=GWE2_Gallionellales_58_10 species=unknown genus=unknown taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 65.0
  • Bit_score: 132
  • Evalue 1.50e-28

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Taxonomy

R_Betaproteobacteria_67_19 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCTACCGGCACAGTGAAGTGGTTCAACGACGCGAAAGGCTACGGGTTCATCACGCCGGACGACGGCAGCGAGGATCTGTTCGCACACTTTTCTGCCATCAACATGCAGGGCTTCAAGTCCCTCAAGGAAGGCCAGAAGGTCAGCTTCGACGTCGTGCAGGGTCCCAAGGGCAAGCAGGCTTCGAATATCCAGAAGGTCTGA
PROTEIN sequence
Length: 68
MATGTVKWFNDAKGYGFITPDDGSEDLFAHFSAINMQGFKSLKEGQKVSFDVVQGPKGKQASNIQKV*