ggKbase home page

RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1233_22

Organism: candidate division WOR-1 bacterium RIFCSPLOWO2_02_FULL_46_20

near complete RP 48 / 55 BSCG 48 / 51 ASCG 10 / 38
Location: 18970..20202

Top 3 Functional Annotations

Value Algorithm Source
type ii secretion system f domain; K12278 MSHA biogenesis protein MshG Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 410.0
  • Bit_score: 784
  • Evalue 6.00e-224
Type II secretion system F domain protein id=4948406 bin=GWC2_Nitrospirae_57_13 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 413.0
  • Bit_score: 326
  • Evalue 4.10e-86
type II secretion system f domain similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 409.0
  • Bit_score: 302
  • Evalue 2.40e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_WOR_1_46_20 → WOR-1 → Bacteria

Sequences

DNA sequence
Length: 1233
TTGATCAGGTTTAAATATAAAGCGATCAACGAAAAGGGCGATTTATTTCAAGATGAGATCGAAGCCGGCTCGTCGGAGGAAGTGGCGAGCCATTTAGGAGCCAAAGGCTACACCCCGGTCAATATTGCCGAGAAGCTGCCTCTGCCGGACTTTTCCCAGTTGTTGGACCCATCACAAATGATGCTAAAAATGCGCCATGTAAAAAGCCGGGAGATAATACTTTTTTTTAGGCAGCTCTCCGCCCTTTTTTCTGCCGGAGTTCCGCTCTTTGATTCCCTGCAGGCCCTGGAGGAACAGTTTGCCAAAGAGCGGATGTACCAGACAATTGTTAAGCTTAAGGACGATGTGGCTGCCGGCACATCTTTTTCCGGAGCATTATCGAAACACTCGGCGGTTTTTTCCGACTTGATTATTGCTATGATAGAAGCAGGGGAGCGGGCAGGGGTAATGGAAGATGTTTTAATTAAGATTACCGCTTTTTTGGAAAAAGAAGACCAGCTGAAACAAAAAGTCCGTGCGGCCCTGCGTTATCCTATCATGGTTATCACAGCTTTAACTATCGCTTTTACTTTTGCCATAATTTTTATTATTCCCAAATTCACTTCTATTTTTGGTTCTTTTAAGACCCAACTCCCTTTGCCAACCAGAATATTGTTGGGGATTAATTATGCCTTTACTAATTTCTGGTGGCTGTTATTGATTGCTGGAATTGGGGGTTATGCTTTATTTAAAACGTATAGTGCTACTCCTCTGGGCCGGCGGCAAGTGGATCTTGTTTTGCTTAAATTGCCGGTGGTCGGATTGTTGATCACCAAGGTTTCCCTGGCCAGGTTTTTTAGCATGCTTTCGGCCATGATCAGCAGCGGGGTTTCGGTGGTTAGTGGACTGGAGATAACTGCCAGAACGGCTGATAATGCCATTGTGGCCCAGACCATTGGTAAGATCAGGGAGCAGGTGATTGCCGGTATGACGTTATCCGACAGCATGAAAGGGCACCATCTTTTTCCTTCGACTTCGGTGCGCATGGTGGCGATTGGCGAAAAATCCGGTACCTTGGAGGGTATGCTTAAGAAGACTGCCGATTATTTTAATGAAGAGAGCGATAATACCGTGGCTGGTTTGATGAGCTTAGTCGAGCCGTTCTTGATCTTTTTCTTAGGCATGTTTGTCCTGCTCCTGGCTATGGGGATATTTCTCCCCATGTGGAGTATGATGCAGCTTTACAGCCAATAA
PROTEIN sequence
Length: 411
LIRFKYKAINEKGDLFQDEIEAGSSEEVASHLGAKGYTPVNIAEKLPLPDFSQLLDPSQMMLKMRHVKSREIILFFRQLSALFSAGVPLFDSLQALEEQFAKERMYQTIVKLKDDVAAGTSFSGALSKHSAVFSDLIIAMIEAGERAGVMEDVLIKITAFLEKEDQLKQKVRAALRYPIMVITALTIAFTFAIIFIIPKFTSIFGSFKTQLPLPTRILLGINYAFTNFWWLLLIAGIGGYALFKTYSATPLGRRQVDLVLLKLPVVGLLITKVSLARFFSMLSAMISSGVSVVSGLEITARTADNAIVAQTIGKIREQVIAGMTLSDSMKGHHLFPSTSVRMVAIGEKSGTLEGMLKKTADYFNEESDNTVAGLMSLVEPFLIFFLGMFVLLLAMGIFLPMWSMMQLYSQ*