ggKbase home page

gwa1_scaffold_119_39

Organism: GWA1_OD1_37_11_partial

partial RP 27 / 55 MC: 1 BSCG 31 / 51 MC: 2 ASCG 6 / 38 MC: 1
Location: 32706..33227

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_07_40_12_curated UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 177.0
  • Bit_score: 255
  • Evalue 7.00e-65
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 172.0
  • Bit_score: 115
  • Evalue 1.30e-23
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 115
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_RIF_OD1_07_40_12 → RIF-OD1-7 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGGATGACATTAAAGAACAATTTAGCGACCTTTACGACCAATACATTGATAAGATCTATAGGTTTGTTTTTATTAAAGTGAATTCGCAGGAAATTGCAGAAGATTTAACTGCAGAAGCCTTTTTGAGGGCGTGGGAAGCGCTTAAAAAACACTCAAATCCTCATCCTAGGAAAATTGAACACCCATCAGCATTTTTATATAAGATTGCCAGGAATTTAGTCATAGATTATTACAGACAAAAAGATAAGTTGCAGTCAGTTAATCTAGAAGCAGTTCAAATTGACGACCCAAGCGCTAATTTAGAAGAAAAGGCGATTCTGGGTTCAGATGTTGATGCCGTGAGAAAGGCATTATCTGGCATCAGAGATGAGTATAGAGAGGTTATAACTTGGCACTATCTAGACGAGCTTAAAGTCCCCGAAATAGCTAGGATAGCAAATAAATCAGAGGGCGCCGTGAGGGTCCTGCTTCATAGAGCCTTAAATTCTCTTCGTGAAAACTTGGAAGTAAAAGAAGCATAA
PROTEIN sequence
Length: 174
MDDIKEQFSDLYDQYIDKIYRFVFIKVNSQEIAEDLTAEAFLRAWEALKKHSNPHPRKIEHPSAFLYKIARNLVIDYYRQKDKLQSVNLEAVQIDDPSANLEEKAILGSDVDAVRKALSGIRDEYREVITWHYLDELKVPEIARIANKSEGAVRVLLHRALNSLRENLEVKEA*