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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_291899_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 2..1108

Top 3 Functional Annotations

Value Algorithm Source
type IV secretion protein Rhs n=1 Tax=Pseudomonas alcaliphila RepID=UPI000315FE4D similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 366.0
  • Bit_score: 621
  • Evalue 5.60e-175
Rhs element Vgr protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 368.0
  • Bit_score: 760
  • Evalue 8.30e-217
Rhs element Vgr protein similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 370.0
  • Bit_score: 594
  • Evalue 2.70e-167

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
GGCTGGGGTGAGGGGAAAGCAGGCAACGCGGACTTCATCCAAGGCTACCGCAACCACTTCACCGCCACCCCCTGGGCGGTGCCCTACCGCCCCAGCCTGGAGCACCCCAAACCACGCATCCTCGGCAGCCAGAGCGCCGTGGTTACCGGCCCCGCCGGCGAAGAAATCCACTGCGATCAATACGGCCGGATCAAAGTGCAATTCTTCTGGGATCGCATTGGTGCGGCCGACGACAAAACCAGCTGTTGGCTGCGAGTGTCGTCGAGCTGGGCCGGCGACCGCTACGGCGCCATCGCCATCCCGCGCATCGGCATGGAAGTGTTGGTGACCTTCCTCGAAGGCGACCCCGACCAGCCCCTGGTCAGCGGCTGCCTGCACCACGCCGCCCATGAAGTGCCCTACGACCTACCGGCGAACAAGACCCGCAGCGTGTTCAAAACCCTGAGCAGCCCCGGCGCTGGCGGCTACAACGAAGTGCGCATCGAGGACAAAAAGGGCGAGGAACAGATCTACATCCACGCCGAGCGCGACTGGGACGAAAACATCGAGCACGACCAGAAGATCCGCATCGGCCACGAACGCCACGATACCGTCGAGGCCAACAGCTACAGCGAATTCAAAGCCGAAGAACACCGCACCACCCACCTCGACCGCAAAAGCGAAATCAAGGCCAGCGACCACCTCACCGTCGGCAACAACCAGCACATCAAGATCGGCACCGGTCAGTTCATCAACGCCGGCAGCGAAATCCACCTGTCCAGCGGCCAGAAAGTCGTGCTCGAAGCCGGCAGCGAACTGACCTTCAAAGCCGCTGGCAGCTTTATCAAGCTCGACGGCGGCGGCATCACCCTGGTCGGGCCGATCATCAAATTCAACTCCGGCGGCGCGCCGGGCAACGGCTCGGGGGCCAGCCCGACCCTGCCAACCAAACCCAAACCGGCGGATACCGCGCCAGTAGGAGAAAAGACCGGAAGAACGCGGGTTAACACTCCGCTCGCCTTGTCTGCGCAAAGCAAAAAAGGCTCCGAAGCGCTGATCGTGGATGTCTGGGGAGACCCGGCACAAGGCGGGCAGATTGAGTTGCTTGGTCCGGAGGACAACGCATGA
PROTEIN sequence
Length: 369
GWGEGKAGNADFIQGYRNHFTATPWAVPYRPSLEHPKPRILGSQSAVVTGPAGEEIHCDQYGRIKVQFFWDRIGAADDKTSCWLRVSSSWAGDRYGAIAIPRIGMEVLVTFLEGDPDQPLVSGCLHHAAHEVPYDLPANKTRSVFKTLSSPGAGGYNEVRIEDKKGEEQIYIHAERDWDENIEHDQKIRIGHERHDTVEANSYSEFKAEEHRTTHLDRKSEIKASDHLTVGNNQHIKIGTGQFINAGSEIHLSSGQKVVLEAGSELTFKAAGSFIKLDGGGITLVGPIIKFNSGGAPGNGSGASPTLPTKPKPADTAPVGEKTGRTRVNTPLALSAQSKKGSEALIVDVWGDPAQGGQIELLGPEDNA*