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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_83565_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 2..1375

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MRE4_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 457.0
  • Bit_score: 807
  • Evalue 8.90e-231
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 457.0
  • Bit_score: 909
  • Evalue 1.40e-261
conjugal transfer coupling protein TraG similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 457.0
  • Bit_score: 798
  • Evalue 9.00e-229

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
GCAGCCTACAACCCTCTGCTGGAGGTACGCCGCGGCACCCATGAGGTGCGCGATGTGCAGAACATCGCCGACATCCTGGTCGACCCGGAAGGTGCCCTGGAAAAACGTAACCACTGGGAGAAGACCAGCCATGCGCTGCTGGTCGGTGCGATCCTGCATGTGCTCTACGCCAGCGACGACAAGACCCTGCGCGGGGTCGCCAACTTCCTCTCAGACCCGGCCTGCACCTTCGAGCTGACCCTGCACCGGATGATGACCACCCCCCATCTCGGCGAGACGCCTCACCCGGTTGTGGCCTCGGCCGCTCGGGAAGTGCTGAACAAGAGCGAGAATGAGCGCTCGGGTGTGCTTTCCACGGCCATGTCCTTCCTTGGCCTGTACCGCGACCCCACAGTGGCCAGCGTGACCGCACGCTGCGACTGGCGAATCGCCGACCTGATCTCGGCCAAACACCCCGTCTCGCTGTACCTGGTGGTGCCGCCATCCGACATCAGCCGCACCAAGCCACTTATCCGCCTGATCCTGAATCAGGTCGGGCGTCGCCTGACCGAATCCTTGGACGGTGCCGACGGCATCGAACGTAGGCACAAGTTGTTGCTGATGCTCGACGAGTTCCCTGCGCTGGGTCGGTTGGACTTCTTCGAATCGGCCCTGGCCTTTATGGCCGGCTACGGGCTACGCGCCTTCCTGATTTCACAGTCGCTCAATCAGATCGACAAGGCCTATGGCCAGAACCACTCGATCCTCGACAACTGCCATGTGCGGGTGACTTTCGCCACCAACGATGAGCGCACCGCCAAGCGCATCTCCGAGACACTCGGTACCGCCACCGAGTTACGTGCTCAGCGCAACTATGCCGGCCACCGTCTTGCTCCCTGGCTGGGCCACCTGATGGTGTCACGCCAGGAGACTGCACGTGCCCTGCTCACGCCGGGCGAGGTGATGCAGCTGCCCACCGACGAATCGGTGGTGATGCTCTCCGGCCATGCGCCGATCCGGGCGAAGAAGCTGCGCTACTTCGCCGACGCCAACTTCCAGCGCCGGGTGCTGCCGGCTCCGCAGCTGCAGGCTGGAAGGTACGTCGATGCGCCAGCGGTCCGGGCAGATGACTGGAGTGCCCTGACAGCGCCGGCAGCCGTTTCCGTCCCACTTGCTGAAACCCATGAAGGCGAATCCCTCGACGACGGCGGCCCACGTCGCCAGCCGGAACTGACGGACTTCGCCGACCTGCCGGTTCCCGAGGACCCGGCCAGCGATCTGTTTCTCCTCGACGAGGACGACGCGCCGACGCCCTTCCCCTCCCAGTTCGAACCGCGACTGCAACGCGCGGCTCGACTGGCCGCCCTTGACCCTGACGACGGAATAGACCTATGA
PROTEIN sequence
Length: 458
AAYNPLLEVRRGTHEVRDVQNIADILVDPEGALEKRNHWEKTSHALLVGAILHVLYASDDKTLRGVANFLSDPACTFELTLHRMMTTPHLGETPHPVVASAAREVLNKSENERSGVLSTAMSFLGLYRDPTVASVTARCDWRIADLISAKHPVSLYLVVPPSDISRTKPLIRLILNQVGRRLTESLDGADGIERRHKLLLMLDEFPALGRLDFFESALAFMAGYGLRAFLISQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLGTATELRAQRNYAGHRLAPWLGHLMVSRQETARALLTPGEVMQLPTDESVVMLSGHAPIRAKKLRYFADANFQRRVLPAPQLQAGRYVDAPAVRADDWSALTAPAAVSVPLAETHEGESLDDGGPRRQPELTDFADLPVPEDPASDLFLLDEDDAPTPFPSQFEPRLQRAARLAALDPDDGIDL*