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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_126885_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(3..434)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 144.0
  • Bit_score: 287
  • Evalue 1.10e-74
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 144.0
  • Bit_score: 285
  • Evalue 8.00e-75
DNA-directed RNA polymerase subunit beta n=2 Tax=Pseudomonas RepID=L1M3S4_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 144.0
  • Bit_score: 285
  • Evalue 2.20e-74

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGGCTTACTCATATACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGATGTCATGGATGTGCCTTATCTCCTGGCCATCCAGCTGGATTCGTATCGCGAATTCCTGCAGGCAGGAGCGACCAAGGACCAGTTTCGTGACATCGGCCTGCATGCGGCCTTCAAGTCCGTTTTCCCGATCATCAGCTACTCCGGCAATGCGGCCCTGGAGTACGTTGGTTATCGCTTGGGCGATCCGGCATTTGACGTAAAAGAGTGCGTGTTGCGCGGCGTCACATTCGCCGTGCCGCTGCGGGTAAAAGTGCGCCTGATCATTTTCGACAAAGAATCGTCGAACAAAGCGATCAAGGACATTAAAGAGCAAGAAGTTTACATGGGGGAAATCCCCCTGATGACCGAGAACGGTACCTTCGTTATCAACGGT
PROTEIN sequence
Length: 144
MAYSYTEKKRIRKDFSKLPDVMDVPYLLAIQLDSYREFLQAGATKDQFRDIGLHAAFKSVFPIISYSGNAALEYVGYRLGDPAFDVKECVLRGVTFAVPLRVKVRLIIFDKESSNKAIKDIKEQEVYMGEIPLMTENGTFVING