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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_196065_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(54..701)

Top 3 Functional Annotations

Value Algorithm Source
leuD; isopropylmalate isomerase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 442
  • Evalue 3.80e-121
3-isopropylmalate dehydratase small subunit n=2 Tax=Pseudomonas stutzeri RepID=LEUD_PSEU5 similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 215.0
  • Bit_score: 414
  • Evalue 8.00e-113
leuD; isopropylmalate isomerase small subunit similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 215.0
  • Bit_score: 414
  • Evalue 2.20e-113

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGAGAGCTTTTACTCAACACACCGGCCTGGTTGCGCCGCTCGATCGCGCCAACGTCGACACCGACCAGATCATTCCCAAGCAGTTCCTCAAGTCGATCAAGCGCAGCGGCTTCGGCCCCAATCTGTTCGACGAGTGGCGCTACCTGGATGTCGGTCAGCCCAACCAGGACAGCTCCAGGCGTCCGCTGAACCCCGATTTCGTGCTGAATTTCCCGCGTTACCAGGGCGCCAGCGTGCTGCTGGCGCGGGAGAATTTCGGTTGCGGCTCGAGCCGCGAGCACGCGCCCTGGGCGCTGGAAGAATACGGCTTCCGTGCGATCATCGCGCCGAGCTTTGCCGATATCTTCTACAACAACAGCTTCAAGAACGGTCTGCTGCCGATCGTCCTCGACGAAAACGATGTCGATGAACTGTTCCAGCAGAGCGAAGCCAGCGAAGGCTATCAACTGACCGTCGACCTGGCGGCGCAGACCGTGACCCGGCCGGACGGCAAGCAATACGGCTTCGAGGTGGATGCCTTCCGCAAGCACTGCCTGCTCAACGGCCTGGACGACATCGGCCTGACCCTGCAGGATGCCGAGGCGATCAAGGCCTTCGAAGTCGATTACCAGCAGCGCAGCCCCTGGCTGTTCGGCGCGATTAAATAA
PROTEIN sequence
Length: 216
MRAFTQHTGLVAPLDRANVDTDQIIPKQFLKSIKRSGFGPNLFDEWRYLDVGQPNQDSSRRPLNPDFVLNFPRYQGASVLLARENFGCGSSREHAPWALEEYGFRAIIAPSFADIFYNNSFKNGLLPIVLDENDVDELFQQSEASEGYQLTVDLAAQTVTRPDGKQYGFEVDAFRKHCLLNGLDDIGLTLQDAEAIKAFEVDYQQRSPWLFGAIK*