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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_44897_6

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 4432..4740

Top 3 Functional Annotations

Value Algorithm Source
Laminin subunit gamma-1Laminin B2 chainPrecursor n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 PF9_PSEPS">RepID=I7JPF9_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 104.0
  • Bit_score: 117
  • Evalue 7.30e-24
mcp11; Laminin subunit gamma-1 similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 104.0
  • Bit_score: 117
  • Evalue 2.10e-24

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGCGCTCTGCCGTTACCCGCTCCCCCACCGCCTGCGTACTGCACGTGCTCGGGCTGGTCGCCTTGATCGTCGCCGTCGATCAGTTCCAGCTGTCCGGCTACCTGAGCATTGCCCTGTTGCTGCTGCTGGCCCTGTGGCCCTGGTTCGGTCCCTGGCGGCGCGACGACGCCGCTGCGGCGGCCAACCGTGCGGCGGCCGTGGACTTCAGCGAGCTGAGCCAAAGCCTGTCCCAGCACACCTGCCATAACGCCTTGTCCGCCGCCCAGGTGGCGCATGCGGTGCAGCAACTGGCCGAAAAGCTGAAGTCG
PROTEIN sequence
Length: 103
MRSAVTRSPTACVLHVLGLVALIVAVDQFQLSGYLSIALLLLLALWPWFGPWRRDDAAAAANRAAAVDFSELSQSLSQHTCHNALSAAQVAHAVQQLAEKLKS