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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_203750_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 1..402

Top 3 Functional Annotations

Value Algorithm Source
Type IV B pilus protein n=1 Tax=Pseudomonas aeruginosa BL10 RepID=U8JDR3_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 129.0
  • Bit_score: 172
  • Evalue 3.30e-40
Type II secretion system protein F {ECO:0000313|EMBL:KFX68122.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 133.0
  • Bit_score: 258
  • Evalue 6.30e-66
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 133.0
  • Bit_score: 219
  • Evalue 6.50e-55

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Taxonomy

Pseudomonas taeanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
CTGCTGAACGTCGCGGTCATGCTTCGTGCGGGCATCAAGCCCTACGACAGCCTGCAGAGGCTCAGCCGCACCGCCAATCCCTGGCTCAAGCAACGCATCGAGGCCACTCGCTATGGCGTCGGCCTGGGCCAGAACTTCGGCCAAGCCCTGAAGAACGCCGGACACGAGTTTCCGGACAAGCAGGCCATCCAGTTCCTCAGTGTACTGGCCAGCCGCAAAGGCTTCGCCGAAGCCGCCCTGCGCTTCAGCGACCGCTGGCTCAATACCAGCCTTAAACAGGTCGACGCCGCTGCCGGCCTGATCCGCGGCCTGTCTCTCCTGCTCGTCGGCGCCATGATGATCCTGGTCCTGCTCGGGACCTACGAGATGGAAGCCATCGTCCGTGCCGGCATTGCGCAATGA
PROTEIN sequence
Length: 134
LLNVAVMLRAGIKPYDSLQRLSRTANPWLKQRIEATRYGVGLGQNFGQALKNAGHEFPDKQAIQFLSVLASRKGFAEAALRFSDRWLNTSLKQVDAAAGLIRGLSLLLVGAMMILVLLGTYEMEAIVRAGIAQ*