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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_724209_2

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 553..1878

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-associated protein rapA; K03580 ATP-dependent helicase HepA [EC:3.6.4.-] Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 441.0
  • Bit_score: 869
  • Evalue 2.60e-249
RNA polymerase-associated protein RapA n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AGZ4_PSEF1 similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 441.0
  • Bit_score: 797
  • Evalue 5.20e-228
RNA polymerase-associated protein rapA similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 441.0
  • Bit_score: 799
  • Evalue 6.60e-229

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
GTGCGCAAGGGCATCGCCGCCACCGTGTTCCACGAAGGCATGAACATCCTCGAGCGCGACCGCGCCGCCGCCTACTTCGCCGACGAGGAATTCGGCGCCCAGGTGCTGATCTGCTCGGAGATCGGCAGTGAAGGGCGCAACTTCCAGTTCGCCCACCACCTGGTGCTGTTCGATCTGCCGAGCCACCCGGACCTGCTCGAGCAGCGCATCGGCCGCCTCGACCGGATCGGCCAGAAGCACCGCATCCAGCTGCATGTGCCCTACCTGGAGAACAGCCCGCAGGAACGCCTGTTCCAGTGGTATCACCAGGCGCTGAATGCCTTCCTCGCCACCTGCCCGACCGGCAACGCCCTGCAGCACCAGTTCGGCACGCGCCTGCTGCCGCTGCTGGAAAGCGGCGACGACGGCGAATGGCAGAGCCTGGTGGATGAGGCCCGTGGCGAACGCGAGCGCCTGGAAGGCGAACTGCACGCCGGCCGCGACCGTCTGCTCGAGCTCAATTCCGGCGGTGCCGGTGAGGGCGAGGCGCTGGTCGAGGCCATCCTCGAACAGGACGACCAGTTCGCCCTGCCTATCTATATGGAGCAGTTGTTCGACGCCTTCGGCATCGACAGCGAGGACCATTCGGACAACGCCCTGATCCTGCGCCCCAGCGAGAAGATGCTGGATGCCAGCTTCCCGCTCGGCGACGACGAGGGCGTGACCATCACCTACGACCGCGACCTGGCCCTGGCCCGCGAGGACATGCAGTTCCTCACTTGGGAACACCCGATGGTGCAAGGCGGCATGGACCTGGTGCGTGCCGGCTCGATGGGCAACACCGGCGTGGCGCTGATCAAGAACAAGGCCCTGAAACCCGGCACCGTACTGCTCGAACTGCTGTATGTCAGCGAAGTGGTGGCTCCGCGCGCCCTGCAACTGGGGCGCTACCTGCCGCCGGCGGCGCTGCGCTGCCTGCTCGACAGCAGCGGCAACGACCTGGCCCACAAGGTGGCGTTCGAGACCTTGAACGACCAACTGGAAAGTGTGCCGCGGGCCAGCGCCAACAAGTTCGTCCAGGCCCAGCGCGATACCCTCAACCCGTTGATCAATGCCGGCGAAGACAAGGTCGCGCCACGCCACCTGGAGCGGGTAGCGGAGGCCAAGCGCCGCCTGGCCGCCGACACCGAAGAGGAACTGGCGCGCCTGACCGCCCTGCAAGCGGTCAACCCGAGCGTGCGCGACAGCGAACTGACCGCCCTGCGCCAGCAGCGCGAGCAGGGCCTGGCCCTGCTCGACAAGGCCGCGCTGCGCCTGGAAGCGATTCGGGTGCTGGTCGCCGGCTGA
PROTEIN sequence
Length: 442
VRKGIAATVFHEGMNILERDRAAAYFADEEFGAQVLICSEIGSEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHRIQLHVPYLENSPQERLFQWYHQALNAFLATCPTGNALQHQFGTRLLPLLESGDDGEWQSLVDEARGERERLEGELHAGRDRLLELNSGGAGEGEALVEAILEQDDQFALPIYMEQLFDAFGIDSEDHSDNALILRPSEKMLDASFPLGDDEGVTITYDRDLALAREDMQFLTWEHPMVQGGMDLVRAGSMGNTGVALIKNKALKPGTVLLELLYVSEVVAPRALQLGRYLPPAALRCLLDSSGNDLAHKVAFETLNDQLESVPRASANKFVQAQRDTLNPLINAGEDKVAPRHLERVAEAKRRLAADTEEELARLTALQAVNPSVRDSELTALRQQREQGLALLDKAALRLEAIRVLVAG*