ggKbase home page

RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_60123_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(1..507)

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase (EC:2.7.7.49) similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 168.0
  • Bit_score: 289
  • Evalue 6.50e-76
Putative reverse transcriptase-maturase-transposase n=2 Tax=Pseudomonas RepID=Q9KWW0_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 169.0
  • Bit_score: 343
  • Evalue 1.30e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGGAAGGCAGATGGGGCAAGGTGAAAGCCCTGCAACACCTGCTGACCCGCTCGTACAGCGGCAAGATGTTAGCTGTCAAACGAGTGACAGAAAATCGTGGCAAGAGAACGCCGGGCGTCGATGGCAAAATCTGGTCGACCCCGGCGGCCAAGTGGAGCGGGATGGAGTCAATGCGACATCGCAGCTACCGTGCGTTGCCGCTTCGACGTATTTACATCCCCAAGAGCAATGGCCAGAAGCGTCCGCTCGGAATTCCCCGCATGCTCTGCAGATCGATGCAGGCACTGTGGAAGCTGGCTCTGGAACCTGTTTCAGAAAGCTTGGCGGATCCAAACTCTTATGGGTTTCGGCCCAACCGTTCGACTGCCGACGCCATCGAATATTGTTTCATCACGCTGGCCAAACGTACGTCGCCAGTGTGGGTACTTGAGGGTGATATCCGTGGCTGCTTTGATAACTTTAGCCACGAATGGATGCTCAAGAACATACCGATGGATAAGACGATC
PROTEIN sequence
Length: 169
MEGRWGKVKALQHLLTRSYSGKMLAVKRVTENRGKRTPGVDGKIWSTPAAKWSGMESMRHRSYRALPLRRIYIPKSNGQKRPLGIPRMLCRSMQALWKLALEPVSESLADPNSYGFRPNRSTADAIEYCFITLAKRTSPVWVLEGDIRGCFDNFSHEWMLKNIPMDKTI