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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_66127_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 3..530

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002E39BEB similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 180.0
  • Bit_score: 271
  • Evalue 6.80e-70
hypothetical protein; K11901 type VI secretion system protein ImpB Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 175.0
  • Bit_score: 344
  • Evalue 6.80e-92
type VI secretion protein, VC_A0107 family similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 175.0
  • Bit_score: 266
  • Evalue 4.70e-69

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
CAAATCACCTACGACGTCGAAATCGGCGACGCCATCGAGAAGAAGGAGTTACCCCTGGTGGTCGGCATTCTCGCCGATCTGTCCGGTAAGCCGGAAACCCCCCTGGCGAAGATGAGCGAGCGGCGCTTCGTCGAGATCGACCGCGACAACTTCAACGAAGTACTCGCCTCCACCGCCCCGCGCCTGGCCGTACAGGTCGACAACAGCATCAGCGGCGACGGCAGCAAGCTCAATGTAGAGCTGAATTTCTCCCATTTCGACGACTTCGATCCGGTCAACCTGGTCAAGCAGGTGACCCCGTTACGGCGTCTGTACGAGGCCCGCCAGCGTCTGCGCGACCTGCTCACCAAGCTCGACGGCAACGACGATTTGGACAAGCTGCTGCAGGACGTGGTGGCCAACACCGAGGGCCTGCAGGAAATCAAGGCGGCTCGTCCCGAAGGTGCCACGCAGGCCGCGGGAAGCCCCGAACCCGCTGCCGGCCCTGCCGACGATGCCGTCGACCAGCCCGACGAACCCCAAGCCTGA
PROTEIN sequence
Length: 176
QITYDVEIGDAIEKKELPLVVGILADLSGKPETPLAKMSERRFVEIDRDNFNEVLASTAPRLAVQVDNSISGDGSKLNVELNFSHFDDFDPVNLVKQVTPLRRLYEARQRLRDLLTKLDGNDDLDKLLQDVVANTEGLQEIKAARPEGATQAAGSPEPAAGPADDAVDQPDEPQA*