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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_66127_2

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 552..2030

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein TssC3 n=1 Tax=Pseudomonas fluorescens Q2-87 RepID=J2F7F4_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 491.0
  • Bit_score: 877
  • Evalue 7.60e-252
impC; protein ImpC; K11900 type VI secretion system protein ImpC Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 492.0
  • Bit_score: 980
  • Evalue 8.90e-283
EvpB family type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 491.0
  • Bit_score: 877
  • Evalue 1.60e-252

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1479
ATGGCCGAACCAAAACCCGGTGCGCAGGGCTCGACCGAGTCCACCACCCTGACCCTGCTCGATCGCATCGTCGCCGAAGGCCGCATGGCCCACGACGACAGCCAGCAGGCCTATGCTCGCGATATGCTGGCGGAGTTCGCCACCCAGGTGCTCGATGAAGGCATGGTGGTCGACAAGGACACCGTGGCCATGATCAACGACCGCATCGACCAGATCGATCAGTTGATCAGCAGCCAGCTCAACGAGATCCTCCATCACCCCGAAGTGAAGAAGCTCGAGGCCTCCTGGCGCGGCCTGCACTTTCTGGTGATGAACACCGAAACCAGCACTCGCTTGAAGCTGCGCCTGTTCAACGTGACCCAGAAGGAACTGTTGAACGACCTGGAAAAAGCCGTCGAGTTCGACCAGAGCGTGCTGTTCAAGAAAGTCTACGAAGAGGACTACGGCACCTTCGGCGGGCACCCCTTCAGCGTGCTGATGGGTGACTTCGAATTCGGCCGTCATCCGCAGGACATCGCCCTGCTGGAGAAACTCTCCAACGTCGCCGCCGCCGCCCATGCGCCCTTCATCGCCGCCGCCAGTCCGCGCCTGTTCGACATGAGCAGCTTCACCGAACTGGCCGTGCCGCGGGATCTGGCCAAGGTCTTCGAGAGCATGGAGCTGATCAAGTGGCGCTCGTTCCGTGCCAGCGAGGATTCGCGCTACGTGTCGCTGGTGCTGCCGCATGTGCTGCTGCGCCTGCCCTACGGCCCGGAGACCCTGCCGGTGGAAGGCATGAACTACGTGGAGGACGTCAATGGCACCGACCACGGCAAATACCTGTGGGGCAATGCCGCCTGGGCGCTGACCCAGCGCGTCACCGATGCCTTCGCCAAATACGGCTGGTGTGCGGCGATTCGCGGCGTCGAGGGTGGCGGCGCGGTCGAGGGGCTTCCGGCGCATACCTTCACCACCAGCGCCGGCGACCTGGCGCTCAAGTGCCCGACCGAGGTGGCGATTACCGACCGCCGCGAGAAGGAGCTGGATGGACTCGGCTTCATTTCCTTGTGTCACAAGAAGAACAGCGACCTGGCGGTGTTCTTCGGTGGCCAGACCACCAACCTGGCGAAGGTCTACAACACCGCCGAGGCCAACTCCAATGCGCGCATCTCGGCGATGCTGCCGTACGTGCTGGCGGCCTCGCGCTTTGCCCATTACCTCAAGGTGATCATGCGCGACAAGATCGGCAGCTTCATGACCCGTGACAACGTGCAGACCTACCTCAACAACTGGATCTCCGACTACGTGCTGATCAACGACAACGCGCCCCAGGAGATCAAGGCGCAGTACCCGCTGCGCGAGGCGCGGGTGGATGTCAGCGAGGTGGCCGGCAAGCCCGGAGCCTACCGTGCCACCGTGTTCCTGCGGCCGCACTTCCAGCTCGAGGAACTGACCGCTTCTATCCGTCTGGTGGCGACCTTGCCGCCGCCAGCCGCCTGA
PROTEIN sequence
Length: 493
MAEPKPGAQGSTESTTLTLLDRIVAEGRMAHDDSQQAYARDMLAEFATQVLDEGMVVDKDTVAMINDRIDQIDQLISSQLNEILHHPEVKKLEASWRGLHFLVMNTETSTRLKLRLFNVTQKELLNDLEKAVEFDQSVLFKKVYEEDYGTFGGHPFSVLMGDFEFGRHPQDIALLEKLSNVAAAAHAPFIAAASPRLFDMSSFTELAVPRDLAKVFESMELIKWRSFRASEDSRYVSLVLPHVLLRLPYGPETLPVEGMNYVEDVNGTDHGKYLWGNAAWALTQRVTDAFAKYGWCAAIRGVEGGGAVEGLPAHTFTTSAGDLALKCPTEVAITDRREKELDGLGFISLCHKKNSDLAVFFGGQTTNLAKVYNTAEANSNARISAMLPYVLAASRFAHYLKVIMRDKIGSFMTRDNVQTYLNNWISDYVLINDNAPQEIKAQYPLREARVDVSEVAGKPGAYRATVFLRPHFQLEELTASIRLVATLPPPAA*