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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_66127_4

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 2605..3054

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Pseudomonas syringae RepID=UPI0001E28AD7 similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 146.0
  • Bit_score: 143
  • Evalue 1.40e-31
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 149.0
  • Bit_score: 294
  • Evalue 6.80e-77
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 145.0
  • Bit_score: 142
  • Evalue 8.70e-32

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
GTGGTCGCGTTCCGGCAACGCAGCCGGGCGCCGTTGCTCGATCGCCTGGCCTCGCAGGACGAGGCCGGGTTCGGCCAGGCCGCGGTCTTCGATCGCCAGGCGCTCAGCGAATCGGTGCGTCAGGAGCTGCTGCGCCTGCTCAATACCCGCCGCTCGCTGCGTCCACGACTCAAGCAATTGACCGTGATCGACTACGGCATCGCCGACTGGAGCGGCCTGTATGCCGACCGCGGCGACGACCGCCGCAAGCTGGCGCGGGACGTCCGTCTGGCCATCGCCCAGTTCGAGCCACGCCTGCAACTGACCGAGGTGGACGTGCGGCCGCTGGACGGCAGCCGCCATGCCCTGCGTCTGCGCATCGCCGGGCACCTGCGCGGTGGCAACGAAACCTGGCCGGTGGCCTTCGTGATGAACCTGGCCGACGGGGTGGTGCATGAGCGATTCGATTGA
PROTEIN sequence
Length: 150
VVAFRQRSRAPLLDRLASQDEAGFGQAAVFDRQALSESVRQELLRLLNTRRSLRPRLKQLTVIDYGIADWSGLYADRGDDRRKLARDVRLAIAQFEPRLQLTEVDVRPLDGSRHALRLRIAGHLRGGNETWPVAFVMNLADGVVHERFD*