ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_46

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 41598..42602

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 334.0
  • Bit_score: 670
  • Evalue 1.00e-189
Beta-lactamase domain protein id=4923587 bin=GWC2_Syntrophus__56_31 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 29.1
  • Coverage: 289.0
  • Bit_score: 109
  • Evalue 5.00e-21
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 156.0
  • Bit_score: 99
  • Evalue 1.90e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGAAACGAACGGTTTGGCGGGCGGGACTTGCGGCGATCGGCACTCTGACATTGAGCACGGCAGTGTTTGCGCAGGCCGCACAACCACCAACGCGCGCGATCACCAACATTGGCGGAGATCTGTATCGCGTGCAGGACAACCAGCACTACACCGTGTTTCTCGTCACGCCGGAAGGCATCATCCTGGGCGATCCGATCAACCCTCAGGTGGCCACCTGGCTGAAGGGCGAGCTGGCCACGCGCTTTCCGAACCGGCAGGTCCGGTACGTGCTCCAGAGTCACCACGATTTCGACCATGCGTCCGGCGCACGGGTATTCAACGACACGGCGGAACTCGTCGGCCACGCCGACTTCAACGCCGAGCTGAGGAAAGCGCAGTCATCGGTTCCTGAGTTCTTCGCCGCGCTGGATCTGAACAAGAACGGCCGTTTTGAGAAAGCCGAGATGCAAGGACAGTTCGGCGCGTTCCTTGCCGTGCAGGATCGCAATGGCGATGGCACGGTGACGCCGGCCGAGTTGTACACCGACGTGATGCCTGTTGAGACCACGTTTACCGATCGCCGCACGGTGACGCTTGGTGGAAAGACCGTGCAACTCATCCATCCGGGAACGGCCCATGCCAAGGACATGGCGGTGCTGTACTTCCCAGCCGAGCGCGTCGTCTTCGCGGTCGATTATCTGCCCGTGAAGTCGCTGCCGTTCGGATTCGCCCCGTCGACGCCGCAAGACGTCATCGCGTCGGTTCGGGCCGTCGAGACGCTCGACTTCGACACGATTACGCCGGGACATGGCGAGGTTGGCGCCAAGGCAGATGTCACGGCGTACAGGCAGTACGTGGAGGATCTGGTGGCCGGCATTCAGGAGGGCATCAGGGCGGGTCGTACGGTTGAGCAGCTGCAGGCGGGCAACATGCTCGATAAGTACAAGGCTTGGCCAAACTACGCGATGCAGCGGAACCAGAACATCGCGGAAGTCTACGGGATCCTGAAAGCGCCGGCGCGATAA
PROTEIN sequence
Length: 335
MKRTVWRAGLAAIGTLTLSTAVFAQAAQPPTRAITNIGGDLYRVQDNQHYTVFLVTPEGIILGDPINPQVATWLKGELATRFPNRQVRYVLQSHHDFDHASGARVFNDTAELVGHADFNAELRKAQSSVPEFFAALDLNKNGRFEKAEMQGQFGAFLAVQDRNGDGTVTPAELYTDVMPVETTFTDRRTVTLGGKTVQLIHPGTAHAKDMAVLYFPAERVVFAVDYLPVKSLPFGFAPSTPQDVIASVRAVETLDFDTITPGHGEVGAKADVTAYRQYVEDLVAGIQEGIRAGRTVEQLQAGNMLDKYKAWPNYAMQRNQNIAEVYGILKAPAR*