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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_7941_22

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 24877..26211

Top 3 Functional Annotations

Value Algorithm Source
sigma-54 interaction domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 444.0
  • Bit_score: 873
  • Evalue 1.10e-250
Fis family sigma-54 specific transcriptional regulator id=12554809 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 453.0
  • Bit_score: 339
  • Evalue 5.10e-90
sigma-54 interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 472.0
  • Bit_score: 319
  • Evalue 1.20e-84

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGCTCCACGCAGGCCGGCCGGACCTGGTGGCGCGCGAGATCGTTGACCTCCTCGAATCCGTGGGCTGTGTCCGGTACGCCACCGCCGTCGCGCGCGCCGCCGATGGGTCTACCACGACGATCGCCGAAACCGGCGAGCCTCGCGACCAGACGGCCACCCCCGAGTGCAGCGAGCGGCGCCTCGCGATTGGCTCCGCTCGAGGCCGCGAGATCTACGTCCTGGTCGGCGCCAGGCCCGACATCGAATCGGCCGCCACCGTCAATGCGGTCGTCATGCTGCTCACCACACTCCACGAGATCGAGCGCGCGCGCGTCGAGCGTGAAGAACGCGCCACGCTCTGGCCGGTTGACGAGCTGCCCATCGAGAACGACGATGCGGTCGCCACCGGCCACATGCGCCAGACGATGTCGTTTGCCAGGAAGATCGCCAACGCCAACGTCACCGTGCTCATCACGGGCGAGAGCGGCACCGGCAAGGAACTGGTCGCCCGGGCCGTTCACACGTACTCGAGCCGCGCTCAGAAGCCATTCATCCCGTTCAACTGCGCCGCCGTCCCGCGCGACATGCTCGAAAGCCAGCTCTTCGGCCACCGCCGCGGGGCCTTCACCGGCGCGGACCGTGACAACCCAGGCGTGGTCCGCAGCGCGCGCGACGGCACGCTGTTTCTCGACGAAATCGGCGAGCTCAGCCCGGAGCTGCAGCCCAAGCTCCTGCGGTTTCTCGAATCAGGCGAGATTTGTCCGCTTGGCGAATCGACGCCGTTTACGGTCGACGTCCGCATCATCGCCGCCACCAATGCCAATCTCGACACGCTGGTACGCGACGGCCGGTTCCGCGAGGATCTCTTCTATCGCCTCAACGTCGTCCATCTCGAGGTCAAGCCGCTCCGCGAACGCCGGGACGAAATCCCCGCGCTCGCCAACCACTTCGTCAGACGCGCGGCCGAAGAATCCCGCAAGGGACACGTCCGTCTGGCGGAAGAAACCATGGAGCGGTTGCTCCTCTACTCCTGGCCGTGCAACGTCCGGCAGCTCCACAACGAGATCCGCCGGATGGTGGCCTTCGCCGAGCCGAACTCGATGCTCGACCCGGACGCCATCTCGATCGACATTGTCCGCGCGACACCCACGTCGGCCCTGCCACACCCGGCGGTGAGAGGACAGGAGATCGCCGTGCCGCTCACCGAGAAGCTGCACCCGACGCTCTCACGCATCGAGTGCGAGATGATCAAGGCCGCGTTGCGGGATCATCACGGCAAGGTCGACGCGACGGCCAAAGCGCTCGGCATCTCACGAAAGGGGCTGTACTTGAAGCGGCAGCGCCTCGGGTTGTGA
PROTEIN sequence
Length: 445
MLHAGRPDLVAREIVDLLESVGCVRYATAVARAADGSTTTIAETGEPRDQTATPECSERRLAIGSARGREIYVLVGARPDIESAATVNAVVMLLTTLHEIERARVEREERATLWPVDELPIENDDAVATGHMRQTMSFARKIANANVTVLITGESGTGKELVARAVHTYSSRAQKPFIPFNCAAVPRDMLESQLFGHRRGAFTGADRDNPGVVRSARDGTLFLDEIGELSPELQPKLLRFLESGEICPLGESTPFTVDVRIIAATNANLDTLVRDGRFREDLFYRLNVVHLEVKPLRERRDEIPALANHFVRRAAEESRKGHVRLAEETMERLLLYSWPCNVRQLHNEIRRMVAFAEPNSMLDPDAISIDIVRATPTSALPHPAVRGQEIAVPLTEKLHPTLSRIECEMIKAALRDHHGKVDATAKALGISRKGLYLKRQRLGL*