ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28585_2

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(1353..2897)

Top 3 Functional Annotations

Value Algorithm Source
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 514.0
  • Bit_score: 994
  • Evalue 6.20e-287
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] id=12554719 bin=CNBR_ACIDO species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 509.0
  • Bit_score: 562
  • Evalue 5.60e-157
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3) similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 530.0
  • Bit_score: 324
  • Evalue 5.60e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1545
GTGGAGCCCCGTGAGGCCGTGTTCGCGCGGCTGTTCGAAGCCGTCCATGAGGGCGTGTACATCGGGACAATCGGTCCCGATTCGACCTCCACGATCGCCGCCAATCCGCATCTGAAGCTCATCTTCGGCTACGCGAGCGAAGCGCTCGATGCCGACGTGCGGCCGTTCGATCGCGAGTGCTTCGTCGATCCGCAGGCCCGCGCGGCGCTCGTCGCGCGCCTCTCGGCTGACGGCGCGGTCAACGACTACCTGCTGCGCCTGCGGCGAGCTGACACGAGCGCCGTGTGGGTCGAGCTCACGGCGGCCGCCGAAGGCCCGCTCGAAGACGGCAGCGTGAGAGTCGAAGCCCTCGTTCGAGATGTCAGCGAGCGCAAGAAGCTCGACGATGAGACCCGCGATATCTACCACCAGCTGCTGCAGGCGGAGAAAATGGCGGCGCTCGGCCAGACGATCTCCGGCGTCGCTCACGAGCTCAACAATCCGCTCGCCACCATCCTGAGCTGGGCCGAACGCCTCTCGTCGCGGGCGACCCTCGAGGAACCGGTTCGTCAGGGACTCGAGACGATCCTCACCGAATCGGAGCGCGCCGCCCGCATCGTCCGCAACCTGCTCACCTTCGCGCGCAAGCGGCAGACGACGCGCGCCATGGTGGACATCAATCAAATCATCCGGGAGACGCTCGCCTTGCGCGCCTACGATCAGCGCGTGTCGAACATCACCGTGATCGATGCGCTCGCGGCCGGGCTGCCGCAGGTGTTCGCCGACGGCCACCAGATGCAGCAGGTCCTCCTCAATCTCATCATCAACGCCGAGCAGGCCATGCTCGCCGCCCACGGCCGCGGCGTGCTCGTGGTGCGCACGTGGCACGACGCGAATCACGAGTCGGTCCTCCTCGAGATCAACGACGACGGCCCGGGCATTCCCGACGACGTGCAGCCGAAAATCTTCGACCCCTTCTTTACGACCAAGGAGGTCGGCAAGGGCACCGGACTCGGACTGACCGTCGCCTACGCGATTATCCAGGAGCACGGCGGACGCATCAGGCTCGAGTCTCAACCACATGCCGGCGCGTCGTTCTACGTGGAGGTGCCAATCACCGGCGGCAAGCTGCCCTCACCGTCGGCCGCGCGTGCGCGACGGTCGGATCGCCTGGAGACGCTGGGAGTCAAAGCACCCGGGGCCGGCGCGTCAATCTTGATCGTCGAAGACGAGGCCGCCTTGGCGATCGCTGTCACCGACGCGCTTCGCGACGCAGGCTACGGTGTCGAACACGCGTCGGACGGCGAAGAAGCGCTGGCCAAAGTGAAGCTGGCGACTTTTGACGCCGTGATCTGCGACCTGAAGATGCCGCGGCTCGACGGAAAGGCCTTCTATAAGGCTCTCGCCGCAGCGGCGCCGGTGCTGGCCCGACGGGTGATTTTCGTGACCGGCGACGTCGCCAGCACTGAGACCGAGATGCTCCTCGAGCAGAGCGCGTGCCCCTGGCTCGCCAAGCCGTTCAGGCTCGGCGATCTGCTGCGGACGGTGCGGGAAGTACTTGCCTAA
PROTEIN sequence
Length: 515
VEPREAVFARLFEAVHEGVYIGTIGPDSTSTIAANPHLKLIFGYASEALDADVRPFDRECFVDPQARAALVARLSADGAVNDYLLRLRRADTSAVWVELTAAAEGPLEDGSVRVEALVRDVSERKKLDDETRDIYHQLLQAEKMAALGQTISGVAHELNNPLATILSWAERLSSRATLEEPVRQGLETILTESERAARIVRNLLTFARKRQTTRAMVDINQIIRETLALRAYDQRVSNITVIDALAAGLPQVFADGHQMQQVLLNLIINAEQAMLAAHGRGVLVVRTWHDANHESVLLEINDDGPGIPDDVQPKIFDPFFTTKEVGKGTGLGLTVAYAIIQEHGGRIRLESQPHAGASFYVEVPITGGKLPSPSAARARRSDRLETLGVKAPGAGASILIVEDEAALAIAVTDALRDAGYGVEHASDGEEALAKVKLATFDAVICDLKMPRLDGKAFYKALAAAAPVLARRVIFVTGDVASTETEMLLEQSACPWLAKPFRLGDLLRTVREVLA*